Chrysoperla carnea: 123299105
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Entry
123299105 CDS
T09255
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03022
Basal transcription factors
ccrn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123299105
09124 Replication and repair
03420 Nucleotide excision repair
123299105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrn03021
]
123299105
03400 DNA repair and recombination proteins [BR:
ccrn03400
]
123299105
Transcription machinery [BR:
ccrn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123299105
DNA repair and recombination proteins [BR:
ccrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123299105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
123299105
NCBI-ProteinID:
XP_044737269
LinkDB
All DBs
Position
4:complement(51032307..51036718)
Genome browser
AA seq
566 aa
AA seq
DB search
MATHSEDVLLQVPQVRYKKGDGTLYVMDQRIAWMLENRDTVSVSHQFQDIKMQKISPEGK
PKIQLQVVLHDGSSSTFHFTNKAGHAAQVSDRDRVKDLLQSLLPKFKRKVDRELEEKNKL
LSSNPALLQLYKDLVITQVVTSEEFWSQHAQQYTKAQSQPKQEIGVNGAFLAEIKPQTDG
CNGLKYNLTPDIIECIFKTYPTVHKKHIENVPSKMTEAEFWTKFFQSHYFHRDRINAGTK
DIFTECGKLDDQELKRDITTGVDDPLLDVTKFDDRQIVVEDTEKNVGSGNLVHQSMLKRF
NQHTIRVLKAGNFSTSKPLDSNSITSSTNSTTTAQDKPSSTNGVATSVQSVSSPKSKKAR
IQEKVIYDDLEVTDNDTNSNRINLSLSKVERYLHGPMPDQGSDNMINVNEFQMLHHRILD
ETKSWTNNNCTRQPFIVNSGAAVSALGELSPGGALMRGFQEQSLAQLVPSEIENEVRHLY
MGLCELLKHFWTSFPPTTPQLEQKVVKMHEALHRYHAARLKPFEDRILRELSPLSQHLTV
HLNQLLNAAYRKFNTWQQRKVQLSHR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacatagcgaagatgttttacttcaagttccacaagttcgttacaaaaaaggt
gatggcacattatacgttatggatcaaaggattgcttggatgctggaaaatcgagatacg
gtttcagtatcgcatcaatttcaggatataaaaatgcaaaaaatctcaccggaaggtaaa
ccaaaaatacaattacaagttgttttacacgatggatcatcttcaacttttcattttaca
aataaagcgggccatgcagctcaagttagtgatagagatcgtgttaaagatttattacaa
tcattgttaccgaagtttaagcgaaaggtagatcgtgaattagaagagaaaaataaatta
ttatcaagtaatccggcattattacaattatataaagatttagttattacacaagtggta
acaagtgaagagttttggtcgcagcatgcgcaacaatatacaaaagcacaatcacaacca
aaacaagaaattggtgtaaatggtgcatttttagctgaaataaaaccacaaacagatggc
tgtaatggtttaaaatataatttaacaccagatattattgaatgtatatttaaaacgtat
ccaactgtacataaaaaacatattgaaaatgttccatcgaaaatgactgaagctgaattt
tggacgaaattctttcaatctcattattttcatagggatcgaattaatgctggaaccaag
gatatattcacagagtgtggtaaacttgatgaccaagaattaaaacgtgatattactaca
ggtgtcgatgatccattattagatgtaacaaaatttgatgatcggcaaattgtagtcgaa
gatacagaaaaaaacgtcggctcagggaatttagtacatcaatctatgttgaagcgattt
aatcaacacacaattcgtgttttaaaagcaggaaattttagcacatcaaaaccattagat
tcaaatagcattacatcaagtacgaattcaacaacaacggcacaagataaaccaagttca
acaaatggagtagcaacatcagttcaaagtgtctcatcgccaaaatcgaaaaaagctcga
atacaggagaaagtgatttatgatgatttagaagtaacagataatgatacaaattcgaat
aggataaatcttagtttatcaaaagtggaacgatatttacatggtccaatgccagatcaa
ggaagtgataatatgataaatgtaaatgaatttcaaatgttacatcatcgaattctagat
gaaacaaaatcatggacaaataataattgtacacgtcaaccgtttatcgtaaatagtggt
gctgctgtgagtgcattaggtgaattaagtccgggtggtgcattaatgcgaggttttcaa
gaacaatcattagcacaattagttccaagcgaaatagaaaatgaagtgcgtcatttgtat
atgggtttatgtgaactattaaaacatttctggacatcgtttccgccaacaacaccacaa
ttagaacagaaagttgttaaaatgcatgaagcattacatcgatatcatgctgcaaggctt
aaaccttttgaggatcgtattttaagggaattatcaccattgtcacaacatttgacggta
catttaaatcagttattgaatgcagcatatagaaaatttaatacttggcaacaaagaaaa
gtacaactatctcatagataa
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