Chrysoperla carnea: 123299207
Help
Entry
123299207 CDS
T09255
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123299207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrn03041
]
123299207
Spliceosome [BR:
ccrn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123299207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
PRP4
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_RIG_2nd
eIF2A
Ge1_WD40
WD_LRWD1
Beta-prop_SCAP
Beta-prop_IFT140_1st
Nbas_N
MIOS_WD40
Beta-prop_VPS8
WD40_like
Beta-prop_Nup120_160
WDR54
Motif
Other DBs
NCBI-GeneID:
123299207
NCBI-ProteinID:
XP_044737438
LinkDB
All DBs
Position
4:complement(55321960..55325677)
Genome browser
AA seq
512 aa
AA seq
DB search
MSDDEDLIYIKKQKTIHYGSLEEQERMRQAAAASKATENLEDTDMVVSVPSPQVHTSNEY
IDLEDAMSKDKQALLEEFERRKKARQINVSTDDAEVKKNLRQLGEPICLFGEGPAERRQR
LRDILSCLGEDAIKKKIEAEEERIQQEKDQETTWYHEGPESLLTARLWIADYSLARAKLR
LEEARRDLELPAATRTARTQDIQKKLNAMTIYSSQVGDTRPISYCSFNPDSTKLATASWS
GLCKVWTVPDCELIQTLRGHTCNVGAVIFHPKSAETENIVCTMASCSSDGSVKLWSFKSE
EPIANIEGHEPHRVSRIQFHPSGRFLGTCCFDSSWRLWDLEQCTEVLHQEGHCKAVYCMS
FQIDGSVCATGGLDSFGRVWDLRTGRCIMFMEGHLKAVYGVDFSPDGYHIVTASEDNTCK
IWDLRKRAIVYTIPAHTNLLSDVKFQKTGGHYLVTSSYDNTAKIWTNRTWQPLKTLSGHD
GKVMSCDISPDSQYIATSSYDRTFKLWAPEFV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgatgaagatctaatttatattaaaaaacaaaaaaccattcattatgggtcg
ctggaagaacaagaacgaatgcgacaagcggctgccgcaagtaaagcaactgaaaatttg
gaagatacagatatggttgtttcagtacctagtccacaagttcacacatcaaatgaatat
atcgacctcgaagatgcaatgtccaaagataaacaagccttacttgaagaatttgaacga
cgaaaaaaagctagacaaatcaatgtatctacggatgacgccgaggttaagaaaaattta
cggcagctaggtgaaccaatttgtctttttggagaaggacccgccgaacgaagacaacgg
ttacgagacattttatcttgtctaggtgaagatgccattaaaaagaaaattgaagctgaa
gaagaaagaatacagcaagagaaagatcaagaaacaacttggtatcatgaaggacctgaa
tcacttttaactgcacggttatggattgcagattattcattagcacgagctaaattacga
ttagaagaagcacgacgagacttagaacttcctgctgccacgcgaacagctcgtactcaa
gatattcaaaagaaattaaacgcaatgacaatttatagtagtcaagttggcgatactagg
ccaatttcatattgtagttttaatcctgattctacaaaattagctactgcatcctggagt
ggactttgtaaagtatggaccgtaccggattgtgaattaattcaaacattacgtggacac
acatgcaacgttggagcagttatttttcatcctaaatctgctgaaactgaaaatattgtg
tgcacaatggcatcctgttcaagcgatggttctgtaaaattatggagtttcaaaagtgaa
gaaccaatagcaaatattgaaggacatgaaccacatcgtgtttctcgcatacagtttcat
ccatcaggtcgatttcttggaacatgttgctttgattcatcgtggcgattatgggattta
gaacaatgtactgaagtattgcatcaagaaggacactgtaaagctgtgtattgtatgagt
ttccagattgacgggtctgtctgtgcaacaggtgggttggattcatttggtcgtgtttgg
gatttacgaacaggacgatgtataatgttcatggaaggtcatttaaaagccgtatatgga
gttgatttttcccccgatggctatcatattgtaacagcaagtgaagataacacatgtaaa
atttgggatttacgtaaacgtgctattgtttatacaataccagcgcatacaaatttatta
tctgatgtgaaatttcaaaaaactggtggacattatttggttacatcctcatatgataat
acggctaaaatatggacaaacagaacatggcaaccattgaaaacattatctggacatgat
ggtaaagtgatgagttgtgatatatcacccgattcacaatatattgctacgtcttcgtat
gatcgaacttttaaattatgggcacccgaatttgtttaa
DBGET
integrated database retrieval system
