Chrysoperla carnea: 123299651
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Entry
123299651 CDS
T09255
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccrn03036
]
123299651
Chromosome and associated proteins [BR:
ccrn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123299651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Dehydrin
Helicase_C
Motif
Other DBs
NCBI-GeneID:
123299651
NCBI-ProteinID:
XP_044737861
LinkDB
All DBs
Position
5:19627918..19639909
Genome browser
AA seq
1368 aa
AA seq
DB search
MSIFKVNNTVQSEKYMEIMPRPKRTAGKKAYAEESDPDDSSDFDEDEDPDKIEVPGGGKD
LATAISGLQAPKKEEVVSTPNNINNMVKMNQKIPGGLVTKGNAQPGYEMVRGSSGISGFP
MMSSPFAMGGGAGMLGAAMGMFSGMPSGFNAAQVLQQMEMATMGLGMGMSPLLIQTFLAQ
NSQHMQMPWGMPPIQQQFKGAPGYWMHQNQKLQPVVEEEEVDDEEMGVAETYADYMPSKL
KLGRKHPDPVVETASLSSVAPVDVWYKVSIPEETIQKGHLSALQLESIVYASQAHDQILP
DGTRAGFLIGDGAGVGKGRTIAGIIFENYLKGRKRAIWVSVSNDLKYDAERDLKDIGAGK
IDVHPLNKLKYAKISSNINGNVKKGVIFSTYSALIGESNSAGGKYKSRLKQLLQWCGEDF
DGLIVFDECHRAKNLCPTGSSKPTKTGLTVLEIQNKLPKARVVYASATGASEPRNMAYMV
RLGLWGEGTPFPEFLDFINAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVGFKIEEVP
LSKDFVKVYDSSVKLWVEAMQKFQEAAELIDAESRMKKTMWGQFWSAHQRFFKYLCIAAK
VPHAVVTAREAVKCGKCVVIGLQSTGEARTLEQLERDDGELSDFVSTAKGVLQTLVEKHF
PAPDRNRIQRLLGLEAPTPSLPVNTNGVKQEASSSSNKRKTEPGTKRMSARQAAVRAAKK
AKQSASSSGSEFESGSEYRLSGSESEHSDEANSDSNASSDFNPFYSDSDSDADPWVGGRK
KKGKKHKKKVAVKRPSTQDKISDLLTRKTQATKTTNGDATKQTPSIAPPRDAIERACSMK
EKLLQQIERLGEKLPPNTLDQLIDELGGPENVAEMTGRKGRVVQTEDGIQYESRSETDVP
LETLNLTEKQRFMDGEKDVAIISEAASSGISLQSDRRARNQRRRVHITLELPWSADRAIQ
QFGRTHRSNQVNAPEYIFLISDLAGERRFASIVAKRLESLGALTHGDRRATETRDLSQFN
IDNKYGRAALEATMKTIMKYEAPLVPPPKDYKGDFFKDVADALVGVGIIVNSEQMPGILS
LDKDYNNMSKFLNRILGMPVDLQNRLFQYFTDTLAAIISQAKKLGRFDMGILDLGTTGDN
VKRIKVYTFLRKHSTGIAPTELHVVQVERGMSWDEAVEKWGELTSSKEGFYLSHQVRNNK
QTAILAVEVEASPKKKSDNKKDQLFTVYRPNTGLQFRQESLAELEKKYKKVTNDEAESHW
KQQYEASVTTCSHAYWRGNCRNATLGQECEVGLRRRQYHILAGSVLSVWARVESVLAQRS
IAQNKMQVVRLRTEDELKIVGTLIPKNCVEALVEALSSDAERVDEKKF
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttcaaagtgaataatacagtacaaagtgaaaagtatatggaaataatgccg
agaccaaagcgtacagcgggtaaaaaggcttatgctgaagaaagtgatcctgacgacagt
tctgactttgacgaagatgaggatcctgataaaattgaagttccaggtggagggaaagat
ttggcgacagcaattagtggattacaagcgcccaaaaaagaagaagttgtatcaactcca
aataatataaataacatggtgaaaatgaatcaaaaaatacctggaggtttggttacaaaa
ggaaatgctcaacctggttatgaaatggttcgaggatcttcaggaatttctggttttcct
atgatgagttcaccgtttgcaatgggcggaggtgccggtatgctaggagcagctatgggt
atgttctctggcatgcccagcggcttcaatgccgctcaagtactgcagcagatggaaatg
gccactatgggcttaggaatgggtatgagccccttattaatacaaacatttcttgcacaa
aattcacaacatatgcaaatgccatggggcatgcctccaatacaacagcaattcaaaggt
gcacctggctattggatgcatcaaaatcaaaagttacaacctgttgttgaagaggaagaa
gttgatgatgaagaaatgggcgtggccgaaacgtacgctgattacatgccatctaaattg
aaacttggtagaaaacatccagatccagtggttgaaacagcttcactgtcaagtgtagca
cccgtggatgtttggtataaagtatcaataccagaagaaacaattcaaaaaggacattta
tctgctttgcaattggaatccattgtgtatgcatcacaagctcacgatcaaattttacca
gatggaaccagagctggatttttaataggtgacggagccggagttggtaaaggtcgtaca
atagctggtattatatttgaaaattatttaaaaggacgcaaacgtgctatttgggtatcg
gtgtcaaatgatttgaaatacgatgcggaacgtgatttaaaagatattggagctggaaaa
attgacgtacatccattaaataaactaaaatatgcaaaaatttcctcgaatataaatggt
aatgtaaaaaaaggtgttatatttagcacatatagtgctttaattggtgaatcaaatagt
gctggcggtaaatataaatcaaggttaaaacaattgctacaatggtgtggagaagacttt
gatggacttattgtatttgatgaatgtcatcgtgcaaaaaatttatgccctaccggctca
tcaaaaccaacaaaaacaggtttaactgtactggagatacaaaataaattaccaaaagca
cgtgttgtatatgctagtgccacgggagcttcagaacctagaaatatggcatatatggta
cggttgggtttatggggtgaaggtacacctttcccagaatttttagattttattaatgcc
gttgaaaagagaggagttggagctatggaaattgttgccatggatatgaaattacgtggc
atgtatatagctagacagttaagtttccatggtgtcggttttaaaatcgaagaagttcca
ctatcgaaagatttcgttaaagtttacgacagttctgtcaaattgtgggtagaagcaatg
caaaaatttcaagaagctgcagaattaatagatgctgaaagtcgtatgaaaaaaacaatg
tggggacaattttggtcagcacatcagcgattcttcaaatatctttgtattgctgccaaa
gtaccacatgcagtagttacagcacgtgaagctgttaaatgtgggaaatgtgttgtaatt
ggtttacaaagtaccggagaagcacgaacattagaacaattagaacgggatgatggagaa
cttagtgatttcgtttcgacagccaagggtgtacttcaaacattagtagaaaaacatttt
ccagcaccagatcgaaatcgtatacagaggttgttaggtttggaagcgccaacaccatca
ttaccggtaaatacgaatggagttaaacaagaagctagtagttccagtaataaacgtaaa
acagaaccaggaactaaacgaatgtcagctcgacaggctgctgttcgtgctgcaaagaaa
gcaaaacaatcagcatcgtcatcaggatctgaatttgaatcaggttcggaatatcggtta
tcaggcagtgaatcagaacatagcgatgaagcgaattcggatagcaacgccagcagcgat
tttaatccattttactcagacagtgattctgatgcagatccatgggttggtggacgaaag
aaaaaaggtaaaaaacataagaaaaaagtagcggttaaacgaccttcaacacaagataaa
atttccgatttactaacacgaaaaacacaagcaacaaaaacaacaaatggcgacgcaact
aaacaaacaccgtcgatagcacctccaagagatgcaatcgaacgtgcatgctcaatgaaa
gaaaaactattacaacaaattgaacgattaggtgaaaaattaccaccgaacacattagat
caattaattgatgaattaggtggtcctgaaaacgttgctgagatgacagggcgtaaagga
cgtgttgtacaaactgaagatggtatccaatatgaatcgagatcagagactgatgtacca
ttagaaacattaaatttaactgagaaacaacgttttatggatggtgaaaaagatgttgcc
attatatcagaagccgcgtcaagtggtatttcattacagagtgatcgtcgtgcacgaaat
caacgacgacgtgttcatataactttagaattgccatggagtgctgatcgtgcaatacaa
cagttcggacgtacacatcgtagtaatcaagtgaacgcacctgaatacatatttttaata
tcagatttagctggtgaacggcgatttgcttcgattgttgcgaaacgtttagaatcttta
ggtgcgctcacgcatggagatcgacgtgcaacggaaacgcgagatttatcacagtttaac
attgataataaatatggtagggcagcgttagaggctacaatgaaaacaattatgaaatat
gaagcaccattggtacctccaccaaaagattacaaaggtgatttctttaaagatgtcgcc
gatgctttggttggagttggtatcattgtgaatagtgaacaaatgcctggaatattatca
ttagacaaagattataataacatgagtaaatttttaaatcgaatattagggatgccagtt
gatttacaaaatcgtttattccaatattttactgatacattagcagcaattatttcacaa
gcgaaaaaattgggacgatttgatatgggaatattagatttgggaacaactggagataat
gtaaaacgtattaaagtctacacattccttaggaaacattcaacaggaattgcacccact
gaattacatgttgtacaagttgaacgtggtatgagttgggacgaagctgttgaaaaatgg
ggtgaattaacaagttcaaaagaaggattttatttatcacatcaagtaagaaataacaaa
caaactgcaatacttgccgtagaagtggaagcaagtccaaagaaaaaatctgataataaa
aaagatcaattatttactgtatatagaccaaatacaggtctacaatttcgtcaagaatcg
ttagctgaattagagaagaaatataaaaaagtaacaaacgatgaagccgaatcacattgg
aaacaacagtatgaagcatcagtaacgacatgttcacatgcttattggcgtggtaattgt
cgtaatgcaacacttggacaagaatgtgaagttggtttgcggcggcgacagtatcatatt
ttagctggtagtgtacttagtgtatgggctcgagtcgaaagtgttctagcacaacggagt
attgcacaaaataaaatgcaagtagtcagattacgaactgaagatgaattaaaaattgtt
ggtacattgattcctaaaaattgtgttgaagcactagttgaagctttatcatcggatgca
gaacgtgttgatgaaaagaaattttaa
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