Chrysoperla carnea: 123299714
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Entry
123299714 CDS
T09255
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrn03041
]
123299714
03036 Chromosome and associated proteins [BR:
ccrn03036
]
123299714
Spliceosome [BR:
ccrn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123299714
Chromosome and associated proteins [BR:
ccrn03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
123299714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
RRM_1
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Lsm_interact
RRM_occluded
RRM_7
RBD_DGKtheta
RRM_MARF1
XLF_CC
Motif
Other DBs
NCBI-GeneID:
123299714
NCBI-ProteinID:
XP_044737958
LinkDB
All DBs
Position
5:complement(42015305..42019965)
Genome browser
AA seq
886 aa
AA seq
DB search
MGIIFLVKMSNSNDEDILSEAGSMEVIPNNDSASSEDEDDEEKERELELQAEELEKRLQE
NYYDYAAYENLVKIRRQLTDIDGLRKTFEKFSAVYPLTGDLWLLWIKSEIAIANSETEIE
KVTQLFEKAVQDYLSVNVWLEYVQFGLKNPNIEKIRELFERAISAAGLHVPQGSLIWDAY
REFELAHLSLIADVQSEEWLIQAHRVASIFKRQLSVPLSDMEVTYEELQNWIKELPRKDE
VITKLSDYEYIYEKSQRDFKKISPYEEDVMNAKNDIEKLDYYEKYIDYEGSYPNRVNILY
ERAVNDVPLNAEFWLKYCKHTVNLGTESLALNVCKRSVRNCSWNSSLWVYFLQTLEYFEK
DHDTITKEFELGLVACSHDARSQLLLWLCYLEHCKRAVSSYLSKISESADGNAMETDTKK
VELNEDYLRSVFTKANTHLYETWGAQGDPNCSISQFWARIEGSIFKDMEAARKIWTDIIK
YGPKDTADLWLEFLNLEIRFGDAKHVRRAHLRALNATKDWPNKIADSWLNYERECGTIQT
IMECNGKCFEVIEKWKKVKLERQTYDEIKSYEKQKTIKNNQNYEKKHDKNDNRNTDRKRK
SEYKEPEERVTKKTKSIESELNAISKLNMEEKSAEKQNQRNDKGYQPPVEMDPETESRTV
FVSNLDYAVDEDRLTQFFGTVKSLRLVKDFKGRSKGFGYVELNSAKEVDEVLKRDRERLD
DRPVFISRCKTAKEKREQAFKYSTTREQHKLFVKGLPLKITQEEIEKIFAPHGKIKDIRM
VCYRNGHFKGIAYVEFEQVADASRALIKTDNTEIDGHVISVAISAPPQRNLKDAGDTGYK
EPGIRKSRIQIPLVPTIVQKKVVQSSTNDTENKPKSNDDFRKMLLK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggaataatttttttagtaaagatgtcaaattcaaatgatgaagatattttatctgaa
gctggaagtatggaagtaataccaaataatgattcagcatcgtcagaagatgaagatgac
gaagaaaaggagcgtgaattagaattacaagctgaggaattagaaaagagacttcaggag
aattattatgattatgccgcatatgaaaatttagttaaaattcgcaggcaattaactgac
atcgatggattacggaaaacatttgaaaaattcagtgcagtgtatccattaactggtgat
ttatggcttttgtggattaaaagcgaaatagcaattgcaaattcagaaaccgaaattgaa
aaagttactcaactatttgaaaaagctgttcaagattatttgtcggttaatgtctggttg
gagtatgtccaatttggattaaaaaaccctaatatcgaaaaaatacgcgaattatttgaa
cgagcaataagtgcagcaggactgcatgtaccacaaggtagtcttatttgggacgcatat
cgagaatttgaacttgctcatttaagtttgatagctgatgttcaatccgaagaatggtta
atacaagctcatcgtgtagcttccatattcaaacgacaactttcagttccattgagtgac
atggaagtaacttacgaagaattacagaattggattaaagaactaccacgaaaagatgaa
gttatcacaaagttatcagattatgaatatatatacgaaaaatcgcaaagagattttaaa
aaaatctcaccgtatgaagaggatgtaatgaatgcgaaaaatgatatagaaaaattggat
tattatgaaaagtatatagattatgaaggttcatatccaaatcgtgttaatattctgtat
gaaagggctgtaaatgatgttccattaaatgcagaattttggttaaaatattgtaaacat
actgtaaacttaggtacagaatcattagcattaaatgtatgtaaacgttctgttcgtaat
tgttcgtggaattctagtctttgggtttattttttacaaacattagagtattttgaaaaa
gaccacgatacgataacaaaagaattcgaattgggtcttgtagcttgtagtcatgatgca
agatcccagcttttactatggttatgttatttggaacattgtaagcgagcagtctcctca
tatttatcgaaaatttctgaatcggcagatggaaatgcaatggaaactgatacgaaaaaa
gttgaattgaatgaagactacttacgtagtgtatttacgaaagcaaatacgcatttatac
gaaacttggggtgcgcaaggcgatccaaactgttcaatttcacagttttgggcaagaatt
gaaggctctatatttaaagacatggaagctgccaggaaaatatggactgatattataaaa
tatggtcctaaagatacggcagatctatggttagaatttttaaatttagaaattcgattt
ggtgatgctaaacatgttcgtcgagctcatcttcgggcattaaatgctactaaggattgg
ccgaataaaattgctgattcgtggttaaattatgaacgtgaatgcggaacaatacaaaca
ataatggaatgtaatggtaaatgctttgaagttatagaaaaatggaagaaagttaaactt
gaacgacaaacctacgatgaaataaaatcatatgaaaaacaaaaaactataaaaaataat
caaaactatgaaaaaaaacatgataaaaatgacaatcgtaacacagatagaaaacgtaaa
tctgagtataaagaacccgaagaacgtgtaactaaaaaaactaaatcaattgaaagtgaa
ttaaatgccatatcgaaattaaacatggaggaaaaaagtgcggaaaaacaaaatcaaaga
aatgataaaggatatcaaccaccagttgaaatggatccagaaacagaaagtcgtacagta
tttgtgagtaatttagattatgctgttgatgaagatcgattaacgcaatttttcggtaca
gtgaaaagtttgcgattggttaaagatttcaaaggacgaagtaaaggttttggttatgta
gaattgaactctgcgaaagaagttgacgaagttttgaaaagagacagagaaagattagac
gatcgtcctgtatttatttcacgctgtaaaactgcaaaagagaaacgcgaacaagcattt
aaatattccacaaccagagaacaacataaattatttgttaaaggtttacctttgaagata
acacaagaagaaatagaaaaaattttcgcaccacatggtaaaataaaagatattcgaatg
gtatgctatcgaaacggtcattttaaaggtatagcgtatgttgaattcgaacaagtagca
gatgcttcacgggctttaattaaaacggacaatactgaaattgatggacatgttattagt
gtggctattagtgctccaccacaaagaaatttgaaagatgctggtgatactggatataaa
gaacctggtataaggaaaagtcgaatacaaataccgctcgtacccacgatcgtgcaaaag
aaagtggtacaaagttcaacgaatgataccgaaaataaaccaaagtcaaatgatgatttt
cgtaaaatgttactaaaataa
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