Chrysoperla carnea: 123299869
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Entry
123299869 CDS
T09255
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrn03021
]
123299869
Transcription machinery [BR:
ccrn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
123299869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_8
TPR_12
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_10
TPR_7
TPR_6
TPR_Slam
ARM_TT21_4th
PknG_TPR
ANAPC3
Peptidase_S41_N
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
123299869
NCBI-ProteinID:
XP_044738202
LinkDB
All DBs
Position
5:76239190..76274924
Genome browser
AA seq
1198 aa
AA seq
DB search
MSGSIEIPLRDTDEVIELYLDQLPDGDEVLGILRQERAQLSIWVNLALEYYKQKKINDFI
KILEASRTDANIDYRDFEKDQMRAFDMLAAYYVQEANRTKNKDKKRELFTKATFLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNHSNSNIPSLLGKACIAYNKKDFRG
ALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQDKARLAFERALQLDSKCVGALVGLAIL
KLNQQQPDAIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYAKVQHLALHAFHNTEN
EAMRAESCYQLARAFHVQNDYDQAFQYYYQATQFAPPAFVLPHFGLGQMYIHRGDSENAA
QCFEKVLKAQPGNYETMKILGSLYANSTSQSKRDIAKNHLRKVTEQYPDDVEAWIELAQI
LEQSDLQGSLQAYGTATRILKEKVGDEIPPEIFNNVGALHYRLGNLEEAKKNLEESLERS
KVEAAEHDPQYYNSIAVTTTYNLSRLYEALCVFDKSEKLYKDIIKEHPNYVDCYLRLGCM
ARDKGQIYEASDWFKEALRINNDHPDAWSLLGNLHLSKMEWGPGQKKFERVLKNPATLQD
AYSLIALGNVWLQTLHQPTKDKEREKRHQERALSMYKQVLRTDPRNIWAVNGIGAVLAHK
GCVNEARDIFGQVREATADFCDVWLNIAHIYVEQRQYVSAIQMYENCLRKFYKYSHVEVL
QYLARAYFKAGKLKDAKMVLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLQTVL
QAVHELGLSHKYFQYLSVHGDRMKYDVTLAALEARQCQDLLSQAQYHVARARRVDEEERA
LRRKQEDERTAFKMKQIEEQQRLEEQRRKDKEQMLQKRQEFKEKTKNALLFEEMPQEKGK
GKGRSRKDQYVSDSGGSDDGVRGNVESGEPRQKSKKRRHSGERKKKSGSSKRKRDKRGND
GRSGSDSDRPRGKKSGGRKKVKEPKKKTDEGLSGKQKMRIVSKATISTSESDDSDGGGKL
KIASGGESGSGSDSGDKRVKKKRRIASESDRSESQSSRSRSRSKSGSRSGSGSRSRSGSR
SKSRSRSKSKSRSRSKSVSRSRSRSKSGSRSGSRSKSGSRSRSRSKSVSRSRSRSKSGSR
SRSGSRSKSRSKSRFRSKSGSRSRSNSKSPSRSRSRSGSKSPSRSRSRSPNKSGSGSD
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtcaatagaaattcctcttcgggatacggatgaggtaatcgaattgtatttg
gatcaattgccggatggcgatgaagttttaggaatattaagacaagaacgtgctcaattg
agtatttgggtgaatttagctttggagtattacaagcagaagaaaattaatgacttcatt
aaaatattggaagcttcccgaacggatgccaacattgattatcgtgattttgaaaaagat
caaatgcgagcattcgatatgttggctgcatattatgtccaagaagcaaataggaccaaa
aacaaggataaaaaacgtgaattattcacgaaggcaactttcttgtatacgacagccgat
aagattattatgtacgaccaaaatcatttgttgggtcgtgcgtatttttgtttattggaa
ggtgataaaatggaacaagccgatgctcaatttaatttcgttttgaatcattccaacagt
aatattccatcgttattggggaaagcgtgtattgcatacaataagaaagatttccgtgga
gctttagcattttataaaaaagctttacgtacaaatccaaattgtccggcagctgtacgt
ttaggcatgggacactgtttcatgaaattaaataatcaggataaagcacgattagccttt
gaacgagctctacaattagattcaaaatgtgtgggagcattagttggattggcaatattg
aagttaaatcaacaacaaccggatgctattcgtactggggtacaaatgttatccaaagcg
tacacaattgattcaacgaatccaatggtcttgaatcatttagcaaatcattttttcttc
aaaaaagactatgccaaagtacaacatttagctttacatgcatttcataatactgaaaat
gaagcgatgcgtgctgaaagctgttatcaattagcacgtgcatttcatgtccaaaatgat
tacgatcaagcattccagtactattatcaagcaacacaatttgcaccacctgcatttgtt
ttaccacattttggtttgggtcaaatgtatattcatcgaggtgattcagaaaatgctgct
caatgttttgagaaagtattaaaagcacaaccaggtaattatgaaacaatgaaaatactt
ggttcattatatgcaaattctacatcgcaatcaaaacgtgatattgcgaaaaatcattta
cgtaaagtgactgaacagtatccagatgatgttgaagcatggatcgaacttgctcaaata
ttagaacaatccgatttgcagggatcattacaagcgtatggtacagccacaagaatttta
aaagagaaagttggtgatgaaataccaccagaaatttttaataatgtaggagcattacat
tataggttagggaatttagaagaagccaaaaaaaatttggaagagtcattagaacgttca
aaagtagaagccgctgaacatgatccacagtattataattcaattgcagttacaactact
tacaatctttcacgattgtatgaagcgttatgtgtgttcgataaatctgaaaaattatat
aaagatataattaaggagcatccaaattatgtggattgttatttacgattaggatgtatg
gctcgtgataaaggtcaaatttatgaagcttctgattggtttaaggaagctctacgtatt
aataatgatcaccctgatgcatggtccttattgggtaatttacatttatccaaaatggaa
tggggacctggccaaaagaaattcgaacgtgttctgaagaatccagcaacattacaagat
gcatattcattgatagcattaggcaacgtttggttacaaacactacatcaacccactaag
gataaagaacgtgagaaacgtcatcaagagcgagcattatctatgtataaacaagtatta
cgtacagatccacgtaacatatgggcagtgaatggaattggtgctgtattagcacataaa
ggttgtgtgaatgaagcacgtgatatatttggacaagttcgtgaagctacagctgatttt
tgtgatgtttggttgaatattgctcacatttatgttgaacaaagacagtatgttagcgcc
attcaaatgtatgaaaattgtttacgaaaattctacaaatatagtcatgttgaagtatta
caatatttagcccgtgcatattttaaagctggtaaattaaaggatgcaaaaatggtatta
ttgaaagcacgacgtgttgcacctcaagatacagttttactgtataatattgcattagta
ttgcaacggttagcaacacaaatattgaaagatgaaaaatcaacattacaaactgtttta
caagctgtccatgaacttggactttcacataaatatttccaatatttatctgtacatggt
gatcgtatgaaatatgatgtaacactagctgctcttgaagcccgtcaatgtcaagattta
ttaagtcaagcccaatatcatgtagcacgcgcacgacgtgttgatgaagaagaacgtgct
ttacgacgtaaacaagaagatgaacgtactgcattcaaaatgaaacaaatagaagaacag
caacgtttggaggagcaacgacgaaaagataaagaacaaatgctacaaaaacgtcaagaa
tttaaggaaaagacaaaaaacgcattgttattcgaagaaatgccacaagaaaagggtaaa
ggtaaagggcgtagtcgaaaagatcaatatgtctcagattcggggggtagtgatgatggt
gtgcgaggtaatgttgaatctggtgaaccacgccaaaaaagtaagaaacgacgacacagt
ggagaacgtaagaagaagagtgggagcagtaaacgtaagcgtgataaacgtggcaacgat
ggtcgttctggctcagattcagatcgccctcgtggtaagaagagcggtggacgtaaaaag
gttaaagaaccaaaaaagaaaactgacgaaggtcttagtggtaaacagaaaatgcgtatt
gtttcgaaagcgacaatttctactagtgaatctgacgatagtgacggcggtggtaaatta
aaaattgctagtggaggtgaaagcgggagtgggagtgatagcggcgataagagagtcaag
aagaagcgacgtattgcatccgaatcagatcgttcagagagtcaatcgagtcgttcacga
tcacgctcaaagagtggatcacggtcaggttctggatcacgatcaagaagtggtagtcga
tcaaaaagtcgatcacgatcgaaaagtaagtcacgatcgagatcaaagagtgtatctcgt
tcacgaagtcgttcaaagagtggatcacgatctggaagtcgttcaaagagtggatcacga
tccagaagtcgttcaaagagtgtatctcgatctagaagtcgttcgaagagtggatcaaga
tctagatctggttcgagatccaaatcccgttcaaagtcaagattcagatctaagtccggt
tcacggtcacgatctaattccaagtcaccatcgcgtagtagatcacgaagtggttctaaa
agtcctagtcggagtagatcaaggtcgccaaataagtctggatctggtagcgattaa
DBGET
integrated database retrieval system
