Chrysoperla carnea: 123300021
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Entry
123300021 CDS
T09255
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccrn03009
]
123300021
Enzymes [BR:
ccrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123300021
Ribosome biogenesis [BR:
ccrn03009
]
Eukaryotic type
Pre-60S particles
Helicases
123300021
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
123300021
NCBI-ProteinID:
XP_044738411
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All DBs
Position
5:complement(57045548..57047695)
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AA seq
596 aa
AA seq
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MSKKWSDLNVTFSKVVKDSINSFNFPTATPVQAAVIPLLLNKKDVTAEAVTGSGKTLAFL
IPLVEILLRREEKLKQHEIGAIVISPTRELAIQTSEVLSAILNHVLNLKQILFIGGNSVD
EDVQNFRKFGGNIVICTPGRLEDLLTRNVDLNLAGAVKSLEILILDEADRLLDLGFRGSL
DTILSYLPRQRRTGLFSATQTRELQSLVRAGLRNPVMVVVKEKQAEATPLLLNNYFTVIN
AEDKMAYLLNFLKENQVNKAMLFLPTCACVDYWNDVLSRLPSDLLSLTIMAVHGQMKQKR
NLILKRFKDASKSLLLCTDLLARGVDIPEVDWVLQFDPPASASAFVHRVGRTARQGAVGS
ALILLLPSEEAYVDFLERNQRVKLLKMDSEITLDQFRGKLVQNLREQQMGDRSIMDKGVR
AFVAHIRAYSKHECSLLLRVKDLPLGKMAMGYGLLQLPKMPELKKCDTTGFETIPNLDFN
SISYKDKQKEEIRQQKLSVYSQSGVWPSKKQRLIQKPTTPWSKTKEMKEEKKNRKLKRKL
ANAKRIENGGPVKKKKKKQKISQEDIDELAKDIALVKKLKNKKITDEQFENEIGMS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaagtggtctgatttgaatgtcacattcagtaaagttgttaaagatagtata
aattcgtttaatttcccaactgctacgccagttcaagccgctgttattcctttactatta
aataagaaagatgttacggcagaggctgtcacaggatcaggaaaaaccttagcatttcta
ataccacttgttgaaattttattgcgacgtgaggaaaaattgaaacaacatgaaatcgga
gctattgttatttcacctacgcgagagctagcgattcaaaccagcgaagttctaagtgca
attttgaatcatgttttaaatttaaaacaaatattattcattggaggaaacagtgtggat
gaagatgtacaaaattttcgcaaatttggtggcaatattgtaatttgtacacccggtaga
ttagaagatttattaacacgaaatgtagacttaaatttagcgggcgcagtgaaaagttta
gaaattttaatattagacgaagcagatcgattattggatttaggatttcgaggatcttta
gatacaattttaagttatttgccccgacagagacgaactggattattttcagcaacacaa
actcgtgaattacaatcgttagtacgtgctgggctacgaaatcccgtaatggttgttgtt
aaggagaaacaagcagaagcaactccattattgttgaataattatttcactgttataaat
gcagaagataaaatggcatatcttttgaatttcctaaaagaaaatcaagtaaataaggca
atgttatttttaccaacatgtgcatgtgtcgattattggaatgacgtgctaagtcgctta
cctagtgatttgctatcactcacaataatggctgttcacggacaaatgaaacaaaaaagg
aatttaattttaaaacgtttcaaagatgcttcaaaatctcttttactgtgtacagatctt
ttagcgcgtggggttgatattcctgaagttgattgggtcttacaatttgatcctccagcg
agtgctagtgcttttgtacatcgtgtaggtcgaacagcacgacaaggagctgtaggttcc
gctttaattttactactgccttcagaagaagcctatgttgattttcttgaacgaaatcaa
cgggtgaaattattaaaaatggatagtgaaatcacacttgatcaatttcgaggtaaattg
gtacaaaacttacgggaacagcagatgggagatcgaagtattatggacaaaggggttcga
gcttttgttgcacatattcgagcttattctaagcatgaatgctcgttactgttacgagta
aaggatttgccattgggtaaaatggctatgggttacggattattacaattacctaaaatg
cccgaattaaaaaagtgtgatacaaccggttttgaaactattccaaatttagattttaac
tcaatttcgtataaagataaacaaaaagaagaaattcgccaacaaaagttatccgtatat
tcacaatctggtgtgtggccgtctaaaaaacaacgtctgatacaaaaaccaactactcca
tggtcgaaaaccaaagaaatgaaagaagagaagaaaaaccgaaaattaaaacgtaaatta
gcaaatgcaaagcgaatagagaatggtggaccagttaaaaagaaaaagaaaaaacagaaa
attagtcaagaggatatagatgaattggcaaaggatattgcgttagttaaaaagttaaaa
aataagaaaattactgatgaacaatttgaaaatgagattggaatgtcttaa
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