KEGG   Chrysoperla carnea: 123300283
Entry
123300283         CDS       T09255                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
ccrn  Chrysoperla carnea
Pathway
ccrn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccrn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123300283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccrn03041]
    123300283
Spliceosome [BR:ccrn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    123300283
 Complex C
   U5 SnRNP specific factors
    123300283
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_RFWD3 eIF2A Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_Vps41 Ge1_WD40 Beta-prop_WDR35_TULP_N Nbas_N Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_NWD2_C WD_LRWD1 PROPPIN
Other DBs
NCBI-GeneID: 123300283
NCBI-ProteinID: XP_044738766
LinkDB
Position
5:complement(9507023..9508308)
AA seq 349 aa
MPVNEYKRKADEYAMVHVQKKSRNELMLSGRDKQLISNATPRTSNLFAPIMLLEGHEGDI
FTVEFHPDGKYLASSGFDRKIFMWSVYGECENVSVMSGHTGAVMELHFSPDGSQIYTCST
DHTVAIWDVPTGQRVKKFKGHSNYVSSVQGARRGPQIIVSGGDDSTIRLWDSRKRHCTST
LNTTYQVTSVTFNDTAEQIISGGIDNDIKVWDLRKNEILYRLKGHTDTITGISLSPDGSY
LLSNALDNTLRIWDIRPYAPQERCVKVFAGHQHNFEKNLLRCAWSPDGSKVSAGSADRFM
YIWDTTSRRILYKLPGHNGSVNDVDFHRNEPIIVSCSSDKQIYMGEIEF
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgccggtaaatgaatataaaagaaaagcggatgaatatgctatggtgcatgttcaaaag
aaatccagaaatgaattaatgctaagtggacgcgataaacaattaatttcaaatgctact
ccaagaacttcaaatttatttgcacctattatgttactcgagggtcacgagggagatatt
tttactgttgaatttcatcccgatggaaaatacttagcatcatctggatttgatcgaaag
atctttatgtggtcagtttatggtgaatgtgaaaatgtatcggtaatgtctggccatacc
ggtgctgttatggaattacatttctccccggatggttcacaaatctacacatgtagtacc
gatcatacagtagcaatttgggatgttcctaccggacaaagagtgaaaaaattcaaggga
cattctaattatgtatcaagtgtgcaaggtgcaagacgaggaccacaaataattgtatca
ggtggtgacgattcaacaattcgtctttgggattcacgtaaacgacattgtacatcaacc
ttaaacacaacatatcaagttacatcggttacatttaacgatacagctgaacagataatt
tcagggggcatcgataacgatatcaaagtttgggatttacgtaaaaatgaaatattatat
cgattaaaagggcatacagatacaattacaggtatctcactaagtcctgatggatcgtac
cttttatcaaatgccctcgataatacgttaagaatatgggatattagaccgtatgcacca
caagaacgatgcgttaaagtatttgcgggacatcaacataattttgagaagaatttatta
agatgtgcatggtcaccagatgggtcaaaagtgagcgctggctcagcagatcgtttcatg
tatatttgggatacaacgtcacgacgtattttatataaattaccaggacataatggtagc
gtgaatgatgtcgattttcatagaaatgaaccaataattgtgtcatgctcgagcgataaa
caaatttatatgggggaaattgaattttaa

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