Chrysoperla carnea: 123300390
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Entry
123300390 CDS
T09255
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccrn03009
]
123300390
Enzymes [BR:
ccrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123300390
Ribosome biogenesis [BR:
ccrn03009
]
Eukaryotic type
90S particles
Helicases
123300390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
ResIII
Flavi_DEAD
Plant_zn_clust
DUF3885
ABC_tran
PhoH
TrwB_AAD_bind
Rpr2
T2SSE
Motif
Other DBs
NCBI-GeneID:
123300390
NCBI-ProteinID:
XP_044738895
LinkDB
All DBs
Position
5:11869858..11874020
Genome browser
AA seq
1176 aa
AA seq
DB search
MGKKGFNWKSRQVVDTIIDNTKTKQIQLDDSFKNSSYDSCNTLVLPSKKRKTKIKQQAVI
QTKLLSKSKRKVLEKIVERKKKKEKRGSLLEALKQVQVSEEELKQFTPIAAIQTKGLRNF
KQQLNLQSNFNKFDDEPVKEVKLNGIKGSFKRKLQSEVDETNKKKKISDLNVVGFDSESE
NSEDSSDSDGELSEIDNDKAEVSVPEPEIKSEEDDNEDKNSKVSEIPQKNEKRSKEQITH
KTSEEGKLQENSKENPSPKIKIESKPATFVSVNRKPEIQAARLKLPILAEEQVVMEKINE
NQIIIIAGETGSGKTTQVPQFLYEAGYAKEKMIGITEPRRVAAISMSKRVCEEMNLTSEE
VSYLIRFEGNVTPKTKIKFMTDGVLLKEIESDFILSKYSVIILDEAHERSVYTDILIGLL
SRIVPLRYKRGNPLKLIVMSATLRIEDFTENPRLFKQTPPVLKIDSRQFPVTIHFNKRTN
ENYLLEAYKKAVKIHNQLPAGGILIFLTGQREVNWLVRKLRKTFPYRLKKSKESENDQEK
EEVSDNDSDDDFCSRKLKKKRTKKQIKLPEINLDDYSLPADTEDVDSADGTDIESEDELE
DEIVTKNTSQPLWALPLYSLLPSYKQAKVFEAPPEGTRLCVVSTNVAETSLTIPNIKYVI
DTGKAKVRLYDKLTGVSTHQVTWASQAAANQRAGRAGRTAPGHCYRLYSSAVFNDTFKEF
SEPEIQQKPVDDLYLQMKCMNIDKIVNFPFPSAPDLIQLKSAEKRLIQIGALQPNEQDTN
KPSTVTPLGRAISKFPVLPRFGKMLALSHQQNLLPFTICMVAALSVPEVLLEVPIFHTDE
MSAKNIRQKWQQTRRAWAGVGNSLLLGDPMVLLRAVGAAEYANSQGSLEKFCNDNGLRHK
AVVEIRKLRVQLTNEIKANMPELDLIVDPKMAPPTDIQAKLLRQILLSGMSDQVAKKLDV
TEVKEIVDKAKFKYAYQAPELEEPIFMHSSSVLRKTAPEWVVYQEIYENNKMFMRGVTAI
EPEWLPTYASAVCNLGEPLKDPEPRYEPKNGKMYCSVTGSFGNQNWLLPQVEIPFPESYA
KYKWFAKCILEGQVFKKLERFKKSLLNAPSTMVKTWANLQPRTNVLLKTLMSRKAGSREQ
LKAIWKTEPDFLLDAYQKWLPESAHNEIALIWPPLD
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaagggctttaattggaaatctcgacaagtggttgatactatcatcgataat
acaaaaacaaaacaaattcaattagacgattcgttcaagaatagcagttatgattcatgt
aatactttagttttgccctcgaagaagcgtaaaactaaaataaaacaacaagcagttatt
caaactaaattattgtcgaaatcaaaacgaaaagtattagagaagattgtagaacgtaag
aagaaaaaggaaaagcgtgggtctttactagaagccttaaagcaagttcaagttagtgaa
gaggaattaaaacaatttacaccaatcgctgcaatccagacaaaaggacttcgaaatttt
aaacagcaattgaacttacaaagtaattttaataaatttgatgatgaacctgttaaagaa
gttaaattaaatggaattaaaggaagttttaaacggaaattgcaatcggaagttgatgaa
actaataaaaagaagaaaattagtgacctaaatgttgtaggttttgactccgaatcagaa
aacagtgaagattctagcgattcagatggtgaattaagtgaaatagacaatgacaaagct
gaagtatcagtacctgaacccgaaattaagtctgaggaagatgacaatgaagataaaaat
tctaaggtatcagaaataccacagaaaaatgaaaaaaggtctaaagaacaaatcactcat
aaaacttcagaagaagggaaactgcaagaaaattcaaaagaaaacccaagtcctaaaatt
aaaattgaatctaaacctgctacatttgtgagtgttaatagaaaaccagaaattcaagcc
gcccgattaaagttacctattttagctgaagaacaagttgttatggaaaaaatcaatgaa
aatcaaatcattattatagctggagaaaccggtagtggaaaaacaactcaagttccacaa
tttttgtatgaagccggttatgctaaagaaaaaatgattggtataacagaaccaagacgt
gttgcagccatttccatgtcgaaacgtgtttgcgaagaaatgaatttaacatcagaagaa
gtttcatatttaattcgatttgagggtaatgttacaccaaaaacaaaaattaaatttatg
accgatggtgttttattaaaagaaattgaaagtgattttattttaagtaaatattcagtc
attattttagacgaagctcacgagagaagtgtttacactgacatattaattggtttacta
tcgagaattgtccccttacgatataaacgtggaaaccccttaaagttaatagttatgtct
gctacattacgaattgaagactttacggaaaatccaaggttattcaagcaaactccacca
gttttaaagatagattctcgtcagtttcctgttacaattcattttaataaacgtacaaat
gaaaattatttacttgaagcttataaaaaagctgttaaaatccataatcaattaccagca
ggaggtattttaattttccttactggacaaagagaagtaaattggttagttagaaaatta
cgcaaaactttcccttatagattgaaaaaatcgaaagaatccgaaaacgatcaagaaaaa
gaagaagtgtcagataatgattcggatgatgatttttgttcgagaaagttgaagaaaaaa
cgtacgaaaaaacaaattaaacttccagaaatcaatttagatgattatagtttacctgcg
gataccgaagatgttgattctgctgatggaactgatattgaaagtgaagatgaattggaa
gacgaaattgtgacgaaaaacacttcacaaccattatgggcactaccattgtattcgtta
ttaccatcgtataaacaggccaaggtgtttgaggctccaccggaaggtactcgattatgt
gtagtttcaacgaatgtagcagaaacatctttaacaattccgaacatcaaatacgttatt
gatacagggaaagcgaaagttagattatatgataaattaacaggagtgagtacacatcag
gtcacatgggcaagtcaagcagctgcaaaccaacgagctggacgtgctggacgtacggca
ccaggtcattgttacagattatattcaagtgcagtgtttaatgacaccttcaaagaattt
tctgaaccagaaattcaacaaaaaccagttgacgatttgtatttacaaatgaaatgtatg
aacatagataaaattgtcaattttccattcccgtcagctcctgatttgattcaattaaag
tcagcggaaaaacgattgatacagattggagcattgcaaccaaatgaacaagataccaac
aaaccttcgactgtaacgccattaggacgagccattagtaagtttcctgtattacctcgt
tttggaaaaatgttggctttaagtcatcaacagaatttattgccttttacaatatgtatg
gtagctgcactttcagtacccgaagtactattagaggtaccaatattccacactgatgaa
atgtctgcaaaaaatatccgacaaaaatggcaacaaactagacgagcatgggctggtgta
ggcaattcgttattattaggagatccaatggttttgttacgagctgttggggctgcagaa
tatgcaaattcacaaggttccttggagaaattttgtaatgataatggtctacgacataaa
gctgttgttgaaattcgaaaattacgagtacaattaactaatgaaattaaagctaatatg
ccggaattagatttaatagttgatccaaaaatggcacctccaacagatattcaagccaaa
ttattacgccaaattttattaagtggaatgtcggatcaagtggctaagaagttagatgta
actgaagtgaaagagattgtcgataaagcgaagttcaaatacgcttatcaagctcctgaa
ttagaagaacctatttttatgcattctagttcagtcttacgaaaaactgcccccgaatgg
gttgtctatcaagaaatttatgaaaataataaaatgtttatgcgaggagttaccgccatc
gaacctgaatggttgccaacatacgcttcggctgtttgtaacttaggtgaacctttaaaa
gatcctgaacccagatatgaacccaaaaatggtaaaatgtattgctctgttactggtagt
tttggtaaccaaaattggttattaccacaagtggaaataccatttcctgaaagttatgca
aaatataagtggtttgcaaaatgtatactcgagggtcaagtgttcaagaaattagaacgg
tttaagaaatcattattgaatgctcctagtacaatggtgaaaacatgggcaaatttacaa
ccgcgtactaatgttcttttgaaaacattaatgtcaaggaaagcaggttccagagagcag
ttaaaagcaatttggaaaactgaacctgattttttattggatgcgtatcaaaaatggttg
ccagaatctgctcataatgaaattgcattaatatggcctccactagattag
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