KEGG   Chrysoperla carnea: 123300832
Entry
123300832         CDS       T09255                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ccrn  Chrysoperla carnea
Pathway
ccrn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ccrn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    123300832
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccrn03021]
    123300832
   03036 Chromosome and associated proteins [BR:ccrn03036]
    123300832
Transcription machinery [BR:ccrn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     123300832
   Coactivators
    SAGA/TFTC/STAGA complex
     123300832
Chromosome and associated proteins [BR:ccrn03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     123300832
    STAGA complex
     123300832
    TFTC complex
     123300832
    SAGA complex
     123300832
    SLIK complex
     123300832
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st TFIID_NTD2 Beta-prop_EML_2 WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML NBCH_WD40 Beta-prop_VPS8 Beta-prop_SCAP DSE1_N WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_Aladin CFAP251_N PAC11 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_EIPR1 Beta-prop_DCAF4 ASA1 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd PEP5_VPS11_N Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 123300832
NCBI-ProteinID: XP_044739418
LinkDB
Position
1
AA seq 652 aa
MEDKQTLLAVLQVLKKYNLKSTEDLLKKEANIPEDALNSEHFSSDSDVTSVLAAYKSEGD
PEVYESAYIELRKFVEGSLDIYKHELGMILYPVLVHMYLELVYNGHSTKAIALMQKFGPE
QDEYYQDDIKKLMQVTTKEHMKSNELADTFKSNSFVIRMSRDTLSLLKRHLQEKRAAVIL
NIVQEHLYFDMYEGVARNKSQIDATSGSVLGEATRQANKTKVYYGLPKEPDLQALMATPV
EEDEDGDPETPDKPKKKKMRRDPLFSKKTKSDPNAPPPDRIPLPDLKDTDKMEKVKALRE
ASKRITLGPESLPSACFYTLLNSVHSVTCAEISEDSSLLAVGFSESMIKVWTLVPQKLKA
MKSADQLQDIDREADDVLVRMMDERNAEKCRTLFGHSGPVYRLSFSNDKTLVLSCSEDGT
IRLWSLHTWTCVVCYKGHIFPVWDVRFSPHGYYFATGSHDKTARLWATDRHQPIHIFAGH
YSDVDVVLFHPNSNYIATGSSDRTVCLWDCVMGVQVRLMTGHKGSIYALAFSIEGKFLAS
AGSDKRVLVWDLAHGHLVAELCAHTQPVHSLAFSRCGNILASGALDSTLKMWDFGKLLEE
TNSEDVNVSHNPDVRAGDGYLLRSYSTKNSPILCLHFTRRNLLLAIGMYEQS
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggaagataaacaaactctattagcagttctgcaagtactcaaaaagtataacttaaag
agtaccgaagaccttttgaaaaaagaagcaaatataccagaagatgcattaaacagtgaa
catttcagctccgattccgatgtaaccagcgtattagcagcgtacaagagtgaaggtgat
ccagaagtttacgaaagtgcttacattgaactaagaaaattcgtcgaaggatcattagat
atttacaaacatgaattaggaatgattttgtatcccgtattagttcatatgtacttggag
ctcgtttataatgggcattcaacgaaagcaattgcgttaatgcagaaatttggtccggaa
caagatgaatattatcaggatgatatcaagaaattaatgcaagtaacaacaaaagaacat
atgaaaagtaacgaattagcggatacatttaaatcgaattcattcgtaattcgaatgtct
cgtgatacactgtctttattaaaacgacatcttcaagagaaacgcgctgctgttatcttg
aatatcgttcaagaacatttatattttgatatgtatgaaggagttgcacgaaataaatca
caaattgatgcaacatccggttcggtattgggagaggcaacacgtcaagcaaacaaaaca
aaagtatattatggattaccgaaagaacccgatttacaagctttaatggccacaccggtt
gaggaggatgaagatggtgatcctgagacaccggataaaccgaaaaagaagaaaatgcga
cgagatccgttattttcgaagaaaactaaatcagatcctaatgctccgccaccggatcga
ataccattgcctgatttaaaagatacggataaaatggaaaaagtaaaagctttacgtgaa
gcatccaaacgaattacactcggaccagaaagtttaccatcagcatgcttttatacactc
ttaaatagtgtacatagtgtgacatgcgcagaaatatcagaagattcaagtttattagcg
gttggatttagtgaatcaatgattaaagtatggacacttgtaccacaaaaattgaaagca
atgaaatcagcggatcaattacaagatattgatcgtgaagcggacgatgttcttgtacgg
atgatggatgaaaggaatgctgagaaatgtcgaacattattcggacatagtggtcctgtc
tatcgtctttcattctcaaatgataagacgttggtgttgtcttgttcagaagatggaact
attcgattatggagtttacatacttggacatgtgtggtatgttacaaaggtcatattttc
cctgtttgggatgtacgattttcaccgcatggttattattttgctactggatcacacgat
aaaacagctcgattgtgggcaacagatcgtcatcaaccaatacatatattcgctggtcac
tattcagatgttgatgttgttttatttcatccaaattcgaattacattgcaaccggttca
agtgatcgtaccgtgtgcctttgggattgtgtaatgggtgtacaagtacgtttaatgact
ggccataaaggttcaatatatgcgttagcgttttcaatcgaagggaaatttctagcatcg
gctggttctgataaacgtgttttagtttgggatttagcacatggacatttagttgctgaa
ctgtgtgcgcatacacaaccggtgcattctttggcatttagtcgatgtggaaatatttta
gcatcaggagcattggatagtacattaaaaatgtgggattttggaaaattattagaagaa
acaaacagcgaagatgtaaatgtttcacataatccagatgttcgagcgggcgatggatat
ttattacgatcatattcgaccaaaaattcaccgattttgtgtttacattttactagacgt
aatcttttattagcgattggaatgtatgaacaatcataa

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