Chrysoperla carnea: 123300832
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Entry
123300832 CDS
T09255
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123300832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrn03021
]
123300832
03036 Chromosome and associated proteins [BR:
ccrn03036
]
123300832
Transcription machinery [BR:
ccrn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123300832
Coactivators
SAGA/TFTC/STAGA complex
123300832
Chromosome and associated proteins [BR:
ccrn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123300832
STAGA complex
123300832
TFTC complex
123300832
SAGA complex
123300832
SLIK complex
123300832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
PEP5_VPS11_N
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
123300832
NCBI-ProteinID:
XP_044739418
LinkDB
All DBs
Position
1:4753424..4757896
Genome browser
AA seq
652 aa
AA seq
DB search
MEDKQTLLAVLQVLKKYNLKSTEDLLKKEANIPEDALNSEHFSSDSDVTSVLAAYKSEGD
PEVYESAYIELRKFVEGSLDIYKHELGMILYPVLVHMYLELVYNGHSTKAIALMQKFGPE
QDEYYQDDIKKLMQVTTKEHMKSNELADTFKSNSFVIRMSRDTLSLLKRHLQEKRAAVIL
NIVQEHLYFDMYEGVARNKSQIDATSGSVLGEATRQANKTKVYYGLPKEPDLQALMATPV
EEDEDGDPETPDKPKKKKMRRDPLFSKKTKSDPNAPPPDRIPLPDLKDTDKMEKVKALRE
ASKRITLGPESLPSACFYTLLNSVHSVTCAEISEDSSLLAVGFSESMIKVWTLVPQKLKA
MKSADQLQDIDREADDVLVRMMDERNAEKCRTLFGHSGPVYRLSFSNDKTLVLSCSEDGT
IRLWSLHTWTCVVCYKGHIFPVWDVRFSPHGYYFATGSHDKTARLWATDRHQPIHIFAGH
YSDVDVVLFHPNSNYIATGSSDRTVCLWDCVMGVQVRLMTGHKGSIYALAFSIEGKFLAS
AGSDKRVLVWDLAHGHLVAELCAHTQPVHSLAFSRCGNILASGALDSTLKMWDFGKLLEE
TNSEDVNVSHNPDVRAGDGYLLRSYSTKNSPILCLHFTRRNLLLAIGMYEQS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaacaaactctattagcagttctgcaagtactcaaaaagtataacttaaag
agtaccgaagaccttttgaaaaaagaagcaaatataccagaagatgcattaaacagtgaa
catttcagctccgattccgatgtaaccagcgtattagcagcgtacaagagtgaaggtgat
ccagaagtttacgaaagtgcttacattgaactaagaaaattcgtcgaaggatcattagat
atttacaaacatgaattaggaatgattttgtatcccgtattagttcatatgtacttggag
ctcgtttataatgggcattcaacgaaagcaattgcgttaatgcagaaatttggtccggaa
caagatgaatattatcaggatgatatcaagaaattaatgcaagtaacaacaaaagaacat
atgaaaagtaacgaattagcggatacatttaaatcgaattcattcgtaattcgaatgtct
cgtgatacactgtctttattaaaacgacatcttcaagagaaacgcgctgctgttatcttg
aatatcgttcaagaacatttatattttgatatgtatgaaggagttgcacgaaataaatca
caaattgatgcaacatccggttcggtattgggagaggcaacacgtcaagcaaacaaaaca
aaagtatattatggattaccgaaagaacccgatttacaagctttaatggccacaccggtt
gaggaggatgaagatggtgatcctgagacaccggataaaccgaaaaagaagaaaatgcga
cgagatccgttattttcgaagaaaactaaatcagatcctaatgctccgccaccggatcga
ataccattgcctgatttaaaagatacggataaaatggaaaaagtaaaagctttacgtgaa
gcatccaaacgaattacactcggaccagaaagtttaccatcagcatgcttttatacactc
ttaaatagtgtacatagtgtgacatgcgcagaaatatcagaagattcaagtttattagcg
gttggatttagtgaatcaatgattaaagtatggacacttgtaccacaaaaattgaaagca
atgaaatcagcggatcaattacaagatattgatcgtgaagcggacgatgttcttgtacgg
atgatggatgaaaggaatgctgagaaatgtcgaacattattcggacatagtggtcctgtc
tatcgtctttcattctcaaatgataagacgttggtgttgtcttgttcagaagatggaact
attcgattatggagtttacatacttggacatgtgtggtatgttacaaaggtcatattttc
cctgtttgggatgtacgattttcaccgcatggttattattttgctactggatcacacgat
aaaacagctcgattgtgggcaacagatcgtcatcaaccaatacatatattcgctggtcac
tattcagatgttgatgttgttttatttcatccaaattcgaattacattgcaaccggttca
agtgatcgtaccgtgtgcctttgggattgtgtaatgggtgtacaagtacgtttaatgact
ggccataaaggttcaatatatgcgttagcgttttcaatcgaagggaaatttctagcatcg
gctggttctgataaacgtgttttagtttgggatttagcacatggacatttagttgctgaa
ctgtgtgcgcatacacaaccggtgcattctttggcatttagtcgatgtggaaatatttta
gcatcaggagcattggatagtacattaaaaatgtgggattttggaaaattattagaagaa
acaaacagcgaagatgtaaatgtttcacataatccagatgttcgagcgggcgatggatat
ttattacgatcatattcgaccaaaaattcaccgattttgtgtttacattttactagacgt
aatcttttattagcgattggaatgtatgaacaatcataa
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integrated database retrieval system
