Chrysoperla carnea: 123301318
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Entry
123301318 CDS
T09255
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123301318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrn03021
]
123301318
Transcription machinery [BR:
ccrn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
123301318
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF3874
Motif
Other DBs
NCBI-GeneID:
123301318
NCBI-ProteinID:
XP_044739993
LinkDB
All DBs
Position
1:41904749..41911824
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AA seq
559 aa
AA seq
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MSMSMNMSNTSSSASGASSGTATKSSSNANSQESVQEYTIRVPKNGRKKYHLMRFNATLN
VDFAKWTNVKMERENNQREFRGMDEEQPKFGAGSEFGRDAREEARRKKLGFAARKYKSED
QPWLLKAGGKNGKKFKGIREGGVSENASYYVFTHAADGAIEAFPLQEWYNFTPIQTYKAL
SAEEAEQEFGKRNRVLNFFSLMMRKRLRGDEDADGENGMGGIDGDDIKLNGGGKSNKSKS
KDKELKITEMDEWMESSGDDSDEDDDDDKEKEDKEEKANKNKKTQKKKKIRDTDAEAFED
SDDGDDEGRELDYISSSSESDDDIEKQLQGVAEEKALRKLLTSDEDSEDEENKSNKSNSS
DDEKDKDKDGEGNDKKGKDKDDKDGKDKEDGDSKAKNKQNKKKASQLKKKDFSKNKNKKD
KKDSSSSLSSDSDSDNENSKKKKDNSSNNNSRSSSPITDNKRKLDGTSNTSPISAKKQKL
DMPAASLPTYLMSSSDSGITEDAVRRYLMRKPMTTTELLQKFKTKKTGLNSEQLVNIMTQ
ILKKINPVKQTIKGKMYLS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcaatgaatatgtctaacacgtcttcgtcggctagtggagcatcttcgggc
actgctactaagtcatctagcaatgcaaattcacaagaatctgttcaagaatacactata
cgtgtcccaaaaaatggccgcaaaaaatatcatttaatgcgttttaatgcaacattaaat
gtcgattttgcaaaatggaccaatgttaaaatggaacgtgaaaataatcaacgtgaattt
agaggaatggatgaggaacaacctaaatttggtgctggaagtgaatttggacgtgatgca
cgtgaagaagctagacgtaaaaaattaggttttgctgctagaaagtataagtctgaagat
caaccttggttgttaaaagcaggcggcaaaaatggaaaaaaatttaaaggtatacgagaa
ggtggcgtatcagagaatgcatcatactatgtgtttacacatgcagctgatggtgcaatt
gaggcgtttccattacaagaatggtataatttcacaccaatacaaacttataaagcttta
tcagctgaagaagccgaacaagagtttggtaaacgtaatcgtgtattaaatttcttctca
ttgatgatgcgtaaacggctgcgaggtgacgaagatgctgacggtgaaaatggtatgggt
ggaattgatggtgatgatattaaattaaatggcggtggtaaatcaaataaaagtaaaagt
aaagataaagaattaaaaattaccgaaatggatgaatggatggagagtagtggtgatgat
tctgatgaggacgatgatgatgacaaggaaaaagaagacaaagaagagaaagctaacaaa
aataaaaagacacaaaaaaagaaaaaaatacgtgatactgatgctgaagcatttgaagat
agtgatgatggtgatgatgagggacgagaattagattatatatcatcgtctagtgaaagt
gatgatgatattgaaaaacaattacaaggtgttgccgaagaaaaggcattacgaaaatta
ttaacatccgacgaagattctgaagatgaagaaaacaaatcaaacaaatcaaatagttcc
gatgatgaaaaagacaaagacaaggatggtgaaggtaatgataaaaagggtaaagataaa
gatgataaagatggtaaagataaagaagatggagattcaaaagctaaaaataaacaaaat
aaaaagaaggcttcacaattgaaaaagaaagactttagtaaaaataagaataagaaagat
aaaaaagattcaagcagttcattaagtagtgattctgattcagataatgaaaacagtaag
aaaaagaaagataattcatcgaataataattctcgttcatcgtcaccaataactgataat
aaacgtaaattggatggtacaagtaatacttcaccaataagtgctaagaaacaaaaatta
gatatgccagcagcatcattaccaacatatttaatgtcatcaagtgattctggtataact
gaagacgctgtacgccgttatttaatgcgtaagccaatgacgacaaccgaattattgcag
aaatttaaaacaaagaagactggtttaaatagtgaacaattagtgaatataatgacacaa
atattaaagaaaatcaatcctgtaaaacaaactattaagggaaaaatgtatttatct
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