Chrysoperla carnea: 123303304
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Entry
123303304 CDS
T09255
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123303304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123303304
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123303304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_EIPR1
Beta-prop_WDR75_1st
eIF2A
WD40_RFWD3
CFAP251_N
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_NOL10_N
PEP5_VPS11_N
Beta-prop_WDR41
Beta-prop_WDR11_2nd
MIOS_WD40
PAC11
Beta-prop_SPT8
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
123303304
NCBI-ProteinID:
XP_044742205
LinkDB
All DBs
Position
1:5020644..5030982
Genome browser
AA seq
955 aa
AA seq
DB search
MDNQLFMKPPTPVGNDMQGSLPNVSMPPPTMSAPPPNMTVPPPNMPGAPGQGQGGGNFNQ
RFNNNQQFQPRQFFRSFQPFVPRGPIGPMTLEDFDGKRLRKSVMRKTVDYNSAIIEALET
RIWHRDYRDRRALQPDVMYYPEMLPPPSYPDNAINCVTTRFVKTATNKMRCPIFCMAWTP
EGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRTMVWSHNDNWMVTGDHAGYVKYWQ
SNMNNVKMFQAHKEALRGISFSPSDSKFVTCSDDGTLRIWDFLHCHEEHVLRGHGADVKC
VQWHPQKSLIISGSKDNQQPIKLWDPKTGQSLATLHAHKSTVMDLKWNDNGNWLITASRD
HLLKLFDLRNLNQEVQTFRGHKKEASSVAWHPAHEGLFASGGSDGSIMFWHVGADKEVGA
IEQAHDSIVWTLAWHPLGHILCSGSNDHSSKFWTRNRPGDMMRDKYNLNTLPAGLSGLEE
FDADEPSVIPGMGPEDKVEITLPSDSASMAIPGLDLDAPPSNAEDKPNKTKKVPYSKPIP
RNFQAQWNDTEEEGPRDSTISEVISHIVENTPGVVPLQKIAPSAIIVYGKVLPVEPGSVL
EKKIAEGPEALKRYIASGAIEELHDVMPHEEDDDYLNDDDDSTTTPLTLPNVVLPTPLPS
SKLQNLAALGAPTLPPAPKIPSLLDAPIPNLTDKVKSERPRKSRFSDINESTNSNDSTSV
NAHFNRPQFNTSNLDNMRANSMDMFSNPNSNFSTNNDENRRQDQDYRDQNRLGGGDQNYR
DQGFRNMYQQDNSNSYNDEMDDYHDEDDRDRDSPKRGRFDSFRDDRDDNDEWQFRNWDNN
DNGNFNGMNNFGNDNFGGRPSPNNFGNNFRPPSGGSNFGNRPFGNQNNFRNDGPSSGGGG
SGWNNGGGGGGGGGGGGGRNNDNFRNNRGFRGRGSRRNNGRGGPRGPQRGRNTFN
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggataatcaattatttatgaaacctccaacaccggttggtaacgatatgcaaggatca
cttccaaatgtgagcatgccgccaccaaccatgtctgcgcctccaccaaacatgacagtt
ccgccaccaaatatgcctggagcacctggacagggacaaggcggtggtaattttaatcaa
cgctttaataataatcaacaattccaaccacgacaattttttcgatcatttcaaccgttt
gttccacgtggtccaatcggaccgatgacattagaggattttgatgggaaacgtttacgt
aaaagtgtgatgcgaaaaactgttgattataattcggcgattattgaagctttagagaca
cgcatttggcatcgtgattatagggatcgaagagcattacaaccggatgtaatgtattat
ccagaaatgttaccaccgcccagttatccagataatgcaatcaattgtgtaacaacacga
tttgttaaaacagctacaaataaaatgcgttgtcccattttctgtatggcttggacacca
gaaggtcgtcgacttgtaactggtgcatcgtcaggtgaattcacattatggaatggttta
acgttcaattttgaaactattttacaggctcacgatagtcctgttcgaacaatggtctgg
tcacataacgataattggatggtaactggcgatcatgcaggctacgtcaaatactggcag
agtaacatgaacaatgtgaagatgttccaggcacataaggaagcccttcgtggcatcagc
ttcagtccatcggatagtaaatttgtaacctgttcggatgatggtacgttgcggatatgg
gatttcttacattgccacgaagaacacgttttaagagggcatggtgcggatgttaagtgc
gtccaatggcatccacaaaaatcacttataatctcaggtagtaaagataatcaacaacca
atcaaattatgggatccaaaaactggacaatctttagctacattgcatgctcataaatca
acggttatggatttaaaatggaacgataatgggaattggttaataactgcgtcacgtgat
catttattaaaattattcgatttacgtaatcttaatcaagaagtacaaacatttagggga
cataaaaaagaagcatcaagtgttgcttggcatccggcgcatgaaggtttatttgcaagt
ggtggatccgatggttcgattatgttctggcatgttggcgccgataaagaagttggtgct
attgaacaagctcacgatagtattgtgtggacgttggcgtggcatccattgggtcatatt
ttatgttcgggatcgaatgatcattcgagtaaattttggacgagaaatcgtcctggtgat
atgatgcgtgacaaatataatttgaatacattaccagcaggacttagtggccttgaagaa
tttgatgcagatgaaccatcagtaattcctggaatgggccctgaggataaagtcgaaata
acattgccgtccgattccgcatcaatggcaatacctggccttgatttggatgcaccaccg
agtaatgctgaagataaaccaaacaaaacgaagaaagtgccttacagcaaaccaattcca
cgtaattttcaagcgcaatggaacgatacagaagaagaaggtcctagagatagtacaatt
agtgaagttatatcgcatattgttgaaaatacacctggtgtggttcctttacaaaaaatt
gctccatcagccattattgtttatggaaaagtgttgcctgttgaaccgggttcagtatta
gagaagaaaatcgcagaaggacctgaagctttaaaacgatacatagcttcaggtgctatt
gaagagttgcacgatgtaatgccacacgaagaagacgacgactatctgaatgatgacgat
gatagtacaactacgcctttaactttaccaaatgttgttcttccaaccccgttgccgagc
tcgaaattacagaatctagcggcattaggagctccaacattacctccagctccaaaaata
ccaagtttattggatgcacccataccaaatctcacagataaagtgaaatcagaacggcca
cgaaaatcacgattttccgacataaatgaatcaacaaattcgaatgactcgacgagcgtt
aatgctcattttaatcgaccacaatttaatacatcgaacttagataatatgcgagcgaat
agcatggatatgtttagtaatccgaattccaattttagtactaacaatgatgaaaaccga
cgacaagatcaagattatcgagatcaaaatcgtcttggaggtggtgatcaaaattatcgt
gatcaaggatttcgaaacatgtatcagcaagacaactcaaattcgtataacgatgaaatg
gatgattatcatgatgaagatgatcgtgatcgagacagtccgaaacgtggtcgatttgat
tcattccgagatgatcgtgacgataacgatgagtggcaatttcgtaactgggacaataac
gataacggtaattttaatggtatgaataattttggcaatgataactttggtggaagacca
tcaccaaataatttcggtaataattttcgtccaccaagtggtggatcaaactttggaaat
cgaccatttggtaatcaaaataacttccgaaatgatggaccatcatcaggtggtggtgga
agtggttggaataacggcggtggaggtggtggaggaggaggagggggaggtggtcgtaat
aatgataatttccgtaataatcgtggatttcgtggtcgtggttctcgtcggaataatgga
cgtggtggacctcggggacctcaaagaggtcgaaatacattcaattaa
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