Chrysoperla carnea: 123305254
Help
Entry
123305254 CDS
T09255
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03030
DNA replication
ccrn03420
Nucleotide excision repair
ccrn03430
Mismatch repair
ccrn03440
Homologous recombination
ccrn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123305254
03420 Nucleotide excision repair
123305254
03430 Mismatch repair
123305254
03440 Homologous recombination
123305254
03460 Fanconi anemia pathway
123305254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccrn03000
]
123305254
03032 DNA replication proteins [BR:
ccrn03032
]
123305254
03400 DNA repair and recombination proteins [BR:
ccrn03400
]
123305254
Transcription factors [BR:
ccrn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123305254
DNA replication proteins [BR:
ccrn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123305254
DNA repair and recombination proteins [BR:
ccrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123305254
MMR (mismatch excision repair)
123305254
DSBR (double strand breaks repair)
HR (homologous recombination)
123305254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
zf-AN1
Motif
Other DBs
NCBI-GeneID:
123305254
NCBI-ProteinID:
XP_044742853
LinkDB
All DBs
Position
1:complement(134225524..134231719)
Genome browser
AA seq
624 aa
AA seq
DB search
MSNIKLTDGILMKIMRGDQVENPVVQVLYCKKIQKNDSNPDRYRLLLSDGRYMINFAMLA
SQVTDLVADGSLTNNAVIVVKRYITTKIQSNGKNDNRRVLLILELDILAKGEDIGMKLGN
PMNLTAEIIAEADKANSSKLLSEKTNGNASNTWDKSPNKPASNTSMQTSMNTTSNSTFNP
NMCHPIEALSPYNSKWVLKVRVMNKSSIRTWSNSKGEGKLFSMDVCDETGEIRITGFRDE
VDKFYDMIQTDRIYYITGGQIKLANKQYSTLKNDYEITLNRDTEIVECHETTNVPTVSFK
FVPIKAIATLEPNSIVDVIGVCKEAGECVHFNSRAGKALIKREIQLVDESQCSINLTLWG
KEAEDFDGSSQPVIAIKGAKINEFMGSKSISGMSSPIRINPDIPEAYKLRGWYDNEGSKL
DNVTNISGRSTTGDGYQSTNSPLMTFREVKAKHVTDSLSFSNIGTIMLIKSDRAVYKSCP
AEGCNKKLLEMGDDSYRCDKCGKEYNDFQYRLLVSMNVADHTGESWMTVFASEAEKILGK
TSQEMGEWLNNDKKEATEYIATKNFSKFMFRCRSRMDTYNDENRMKTVAFAAEPINHVVV
NKYYLDKIKELTGIQKKTSNGMEY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatataaagcttacagatggtatattaatgaaaataatgagaggtgatcaggtt
gagaatcctgttgtccaagtattatactgcaaaaaaattcaaaagaatgatagtaaccct
gatcgatatcgattattactatctgatggtagatacatgattaattttgcaatgcttgca
agtcaagtcaccgatttagtggccgatggaagcttaacaaataatgcggttattgttgtt
aaaagatatattactactaaaattcaaagtaatggcaagaatgataatcgacgagttctt
ttaattttggagcttgacattttggctaaaggtgaagatattggtatgaaattagggaat
ccaatgaatttaacggccgaaataattgctgaagctgataaagcaaatagttcaaaatta
ttatctgaaaaaactaatggaaatgcatcaaatacttgggataaaagtccaaataaaccg
gctagtaacacatcaatgcaaacttcaatgaatacaaccagcaattcaacatttaatcca
aatatgtgccatccaattgaagctctcagtccttacaactccaaatgggtattaaaagtt
cgtgttatgaacaaaagtagcatacgaacctggtcaaattctaaaggagagggtaaatta
ttcagtatggatgtgtgtgatgaaactggtgagataagaattacaggatttcgggatgaa
gtggataaattttatgatatgattcagaccgatcgaatttattacataactggaggtcaa
atcaaactcgccaataaacaatattcaacattgaaaaatgattacgaaattacattaaat
cgtgacacagaaatcgttgaatgtcatgagactacaaacgttccaactgtatcctttaaa
tttgtaccgattaaagcgattgctaccttggagccaaattctattgttgatgtgattgga
gtttgcaaagaagcaggtgaatgcgtgcattttaattctagagctggtaaagctttgatc
aagcgagaaattcaattggttgatgaatcacaatgttcgattaatttaacattatggggc
aaagaagcagaagattttgatggcagctcacagcctgtaatcgctataaaaggtgctaaa
atcaatgaatttatgggctcaaaaagtatatcaggaatgagttcaccaatacgtattaat
cccgatataccagaagcatataaattacgtggttggtatgacaacgaaggttctaaattg
gacaatgttacgaatatatctggtagaagtacaacaggcgatggttatcaatcaactaat
tcaccattgatgacgttcagggaggttaaagcgaaacatgtcaccgacagtttatcattt
tcaaatattggtacaatcatgttaattaaatccgatcgtgctgtttataaatcatgtccg
gctgaaggatgtaataagaaattacttgaaatgggtgatgattcctatcgttgcgataaa
tgtggtaaagaatacaatgatttccaatatcggcttttagtcagtatgaatgttgccgat
catacaggtgaaagttggatgactgtttttgcaagtgaagccgagaaaattttaggaaaa
acatctcaagaaatgggcgaatggttgaataatgataaaaaggaagctacagaatatatt
gcaactaaaaatttctctaaattcatgttcagatgtcgctcaagaatggatacctacaat
gatgaaaatcgtatgaaaacagtagcatttgcagctgaacctataaatcatgtagtggtt
aataaatattacctggataaaattaaggaattaactggtatccaaaagaagacatcaaat
ggcatggagtattaa
DBGET
integrated database retrieval system
