KEGG   Chrysoperla carnea: 123305835
Entry
123305835         CDS       T09255                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
ccrn  Chrysoperla carnea
Pathway
ccrn03013  Nucleocytoplasmic transport
ccrn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccrn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123305835
  09122 Translation
   03013 Nucleocytoplasmic transport
    123305835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccrn03019]
    123305835
   03041 Spliceosome [BR:ccrn03041]
    123305835
Messenger RNA biogenesis [BR:ccrn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     123305835
Spliceosome [BR:ccrn03041]
 Complex C
  Other components
   EJC/TREX
    123305835
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123305835
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_NOL10_N Beta-prop_Vps41 Tricorn_2nd WD40_MABP1-WDR62_1st eIF2A DSE1_N Beta-prop_HPS5 RMC1_N Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C TRM82_WD Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th PAC11 Beta-prop_ELP1_1st Beta-prop_EIPR1 Beta-prop_DCAF12 B-prop_COPA_B_2nd Beta-prop_SCAP WD40_RFWD3 PD40 Beta-prop_VPS8 CDGP
Other DBs
NCBI-GeneID: 123305835
NCBI-ProteinID: XP_044743606
LinkDB
Position
1
AA seq 322 aa
MKSIQDKIEELQTYFKSHNKHREYQAHNSKVHSVGWSCDGRRLASGSFDKCVSIFTLDND
RLNKECTCRGHAGSVDQLCWHASNPDLLSTASGDKTVRVWDARTQKSAAIIATKGENINI
TWAPNGNTIAVGNKEDLVTFIDTRTHKIIAEEQFSFEVNEISWNNNSDLFFLTNGQGCIH
ILSYPELELQHVLKAHPGTCICIEFDPKGRYFATGSADALVSLWDAEELSCLRVFTRLDW
PVRTISFSHDGQLLASASEDLIIDIGYTETGEKIADIPVEAATFTVAFHPKQYLLAYACD
DKDTYDRKRDAGSLKVWGFPSD
NT seq 969 nt   +upstreamnt  +downstreamnt
atgaaatcaattcaagataaaattgaagaactgcaaacatatttcaaaagtcacaataaa
catcgtgaatatcaagctcataattcaaaagtacattcagttggatggagttgcgatgga
cgacgtttagcctccggctccttcgataagtgtgtatccatatttacactggataatgat
cgattgaataaagaatgcacttgtcgaggtcatgcaggatctgtggatcaattgtgttgg
catgcttcaaatcctgatctacttagtacagccagtggcgataaaactgtacgtgtatgg
gatgctagaacacaaaaatctgctgctataattgcaactaaaggcgagaatataaatatt
acatgggctccgaatggaaatacaatcgcagttggaaataaagaagatttagttactttt
attgatacgcgcactcacaaaattatagctgaagaacaattttcttttgaagttaatgaa
atttcttggaacaataacagtgatttattctttttaacaaacggtcaaggctgtattcac
atcttaagttatccagagttagaattacaacatgtattgaaagctcatccaggaacttgt
atatgtattgaatttgatcccaaaggaagatactttgcaacaggaagtgcagatgcttta
gtttcattatgggatgcagaagaattatcatgtttgagagtttttacacgtttggattgg
cctgttcgaacaatatcattcagtcatgatggtcaattgttggcttcagcttcagaagat
ttaataatagatattggttacacagaaacaggcgaaaaaatagcagatattccagtggaa
gctgctacattcacagtagcctttcatccaaaacaatacttattggcatacgcatgtgat
gacaaagacacttatgatcgaaaacgtgacgcaggcagtttaaaagtttggggttttcca
tctgactaa

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