Chondromyces crocatus: CMC5_014560
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Entry
CMC5_014560 CDS
T04010
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ccro
Chondromyces crocatus
Brite
KEGG Orthology (KO) [BR:
ccro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccro03032
]
CMC5_014560 (ihfB)
03036 Chromosome and associated proteins [BR:
ccro03036
]
CMC5_014560 (ihfB)
03400 DNA repair and recombination proteins [BR:
ccro03400
]
CMC5_014560 (ihfB)
DNA replication proteins [BR:
ccro03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CMC5_014560 (ihfB)
Chromosome and associated proteins [BR:
ccro03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CMC5_014560 (ihfB)
DNA repair and recombination proteins [BR:
ccro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CMC5_014560 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AKT37323
UniProt:
A0A0K1E9Q8
LinkDB
All DBs
Position
1924806..1925162
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AA seq
118 aa
AA seq
DB search
MTKSELIDAIAGRGELTKARAEMLVNCVFDAMTEALQRNEGIEIRGFGSFTVRPYKPYSG
RNPRTGQPVPVPAKRLPFFKVGKELKELVNNSRQFAITGGDDGDDDGDDDIIEDDDDE
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagcgagctcatcgacgcgatcgcgggacgcggcgaactcaccaaggcccgc
gccgagatgctggtcaattgcgtcttcgacgcgatgaccgaggcgctgcagcgcaacgag
ggcatcgagatccggggcttcggcagcttcacggtgcgtccgtacaagccctacagcggt
cgtaacccgcgcacgggtcagcccgttcccgtcccggccaagcggctgccgttcttcaag
gtcggcaaggaactgaaggagctcgtcaacaacagccgccagttcgccatcaccggcggg
gacgacggggacgacgacggggacgacgacatcatcgaggacgacgacgacgagtag
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