Chondromyces crocatus: CMC5_025240
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Entry
CMC5_025240 CDS
T04010
Name
(GenBank) uncharacterized protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
ccro
Chondromyces crocatus
Pathway
ccro02020
Two-component system
ccro02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CMC5_025240
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CMC5_025240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccro03021
]
CMC5_025240
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ccro02035
]
CMC5_025240
Transcription machinery [BR:
ccro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CMC5_025240
Bacterial motility proteins [BR:
ccro02035
]
Flagellar system
Flagellar assembly proteins
Stator
CMC5_025240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_ECF
HTH_28
KORA
GerE
Motif
Other DBs
NCBI-ProteinID:
AKT38378
UniProt:
A0A0K1ECS4
LinkDB
All DBs
Position
complement(3334966..3335736)
Genome browser
AA seq
256 aa
AA seq
DB search
MPVAEPFWQYSEARAEEDIPPESASFRRDRTRSNHDGRSRRTTPPLACALDTARPSTPRP
QKSERVDDDVCPEALKGYLPLVYKLVRQLSRRLPANVERDDLLAAGIFGLLDSIRRNGGS
EGEAFASYARMRIRGAIVDELRAQDWLSRRAREAVTASGSEGTSFVPLHEMTPGEESTHL
AHGEDPSEALVAHSERHALTSAIAKLPERERRVVGMYYFEGAKLKEIGAELGVSEPRVSQ
LHARALGRLRGMLSAA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgcggaacctttctggcagtactcagaggctcgcgcggaggaggacatccct
cccgaaagcgcatcgtttcgaagggacagaacgcgcagcaatcacgatggccgttcgcgc
cgaacgacgccacccctggcatgtgcgctcgacaccgctcgaccatcgacaccgcgaccg
cagaaatccgaacgcgtcgacgacgatgtatgtcccgaagcgctcaaggggtacctgccg
ctcgtctacaagctcgttcgacagctctcgcgtcgccttccagcgaacgtcgagcgtgac
gatcttctcgcagcagggatcttcggcttgctcgactccatacggcgtaacggtggcagc
gaaggtgaagccttcgcgagctacgcacgcatgaggatccgcggcgccatcgtggacgaa
ttgcgcgcacaggactggctctcacggcgcgcgcgcgaagcggtgacggcgtcgggctcc
gaaggtaccagcttcgtgccgctgcacgagatgaccccaggagaggagtcgacccacctg
gcccacggcgaggatccctccgaggcgctcgtggctcacagcgagcgtcatgcgctgacc
tccgcgatcgccaagctacccgagcgagagcgccgcgtggtcgggatgtactactttgaa
ggtgccaagctgaaagagatcggcgccgagcttggcgtgagcgagccacgggtctcgcag
ctccacgcgagagcgttggggcgcctgcgcggcatgctcagcgcggcctag
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