Chondromyces crocatus: CMC5_033880
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Entry
CMC5_033880 CDS
T04010
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ccro
Chondromyces crocatus
Pathway
ccro03030
DNA replication
ccro03430
Mismatch repair
ccro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMC5_033880 (holA)
03430 Mismatch repair
CMC5_033880 (holA)
03440 Homologous recombination
CMC5_033880 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccro03032
]
CMC5_033880 (holA)
03400 DNA repair and recombination proteins [BR:
ccro03400
]
CMC5_033880 (holA)
Enzymes [BR:
ccro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMC5_033880 (holA)
DNA replication proteins [BR:
ccro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CMC5_033880 (holA)
DNA repair and recombination proteins [BR:
ccro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CMC5_033880 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AKT39240
UniProt:
A0A0K1EEE4
LinkDB
All DBs
Position
4513912..4515135
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AA seq
407 aa
AA seq
DB search
MPEIPRVDPRAVAPGKSDPWRRIHRTLRHGARPPGHPGRCAPRAGLDALCGSLDAPGVTP
DQALKEVSQGSLRPVYLVMGDERWYVDRVVSAIREAVAKGGIAGFNEDKFMAGEATVEAV
LGAAKMLPMMAPRRFVLARGLERWEKKSDDGDEAAAPAKKGVSKQLPPLDALAEYAKTPA
STAVLVLVASKLHAQRKLVTLAKKSDFLVACEQLPRRSLPGFIKTVAKEKGNAISGDVAE
HLAEIAGPELGYVVDALERLSLFVGEKQPITEEAVAEIVIRVRQSTTWELLDAIGQRHLD
KALATLADVYDPSDRGLKLLGLVAWSVRGLVKFDAALALGVSPQEAAQRAGVPPFKAGEM
AQTVRRLPPGTLPRWLRLLAETDLALKGSKRPPQAILETMLLDMCAN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaatcccgcgggtcgacccgcgggccgtagcgcctgggaaatccgatccatgg
cgcaggatacaccgcacgctccgccacggcgcacgaccacctgggcacccgggccgctgc
gcacctcgcgcgggccttgacgcgctgtgcggatcgctcgatgccccaggcgtgactccc
gatcaagcgctcaaggaagtgagccagggctcgctacgcccggtctacctcgtgatgggc
gacgagcgctggtacgtcgatcgcgtggtcagcgcgatccgcgaagcggtggcgaaggga
ggcatcgccggcttcaacgaggacaagttcatggccggcgaggccacggtcgaagcggtc
ctcggcgcggcgaagatgctgccgatgatggcccctcgccgcttcgtgctcgcgcgcggc
ctggagcgctgggagaagaagagcgacgacggcgatgaagctgccgccccggcgaagaag
ggcgtctcgaagcagctccccccgctcgacgccctcgcggagtacgccaagacgcccgca
tcgaccgccgtgctggtcctcgtggcgagcaagctgcatgcgcagcggaagctggtcacg
ctggcgaagaagtcggacttccttgtcgcgtgcgagcagctccccaggcgatcgctgccc
gggttcatcaagacggtggcgaaggagaaaggcaacgccatctcaggcgacgtcgccgag
cacctcgccgagatcgcggggccagagctggggtacgtcgtcgacgcgctggagcggctc
tccctcttcgtgggggagaagcagccgatcaccgaggaggccgtggccgagatcgtgatc
cgcgtccggcagagcacgacctgggagcttctggacgccatcggccagcgccacctcgac
aaggcgctcgcgaccctggccgacgtctacgacccgagcgaccgagggctgaagctcctc
ggcctcgtggcctggtcggtgcgcgggctggtgaagttcgacgcggcgctggccctgggt
gtgtcgccgcaagaggcggcgcagcgcgcgggcgtcccgcccttcaaggcgggcgagatg
gcgcagacggtgcggcggttgccgcctgggacgctgccccgctggctgcgcctcctggcg
gagaccgacctggcgctgaagggatcgaagcggcctccgcaggcaatcctggagacgatg
ctgctcgacatgtgcgcgaactga
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