Chondromyces crocatus: CMC5_037940
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Entry
CMC5_037940 CDS
T04010
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccro
Chondromyces crocatus
Pathway
ccro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CMC5_037940 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccro03019
]
CMC5_037940 (pnp)
03016 Transfer RNA biogenesis [BR:
ccro03016
]
CMC5_037940 (pnp)
Enzymes [BR:
ccro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CMC5_037940 (pnp)
Messenger RNA biogenesis [BR:
ccro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CMC5_037940 (pnp)
Transfer RNA biogenesis [BR:
ccro03016
]
Prokaryotic type
tRNA degradation factors
CMC5_037940 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
EP400_N
ToxA_N
Motif
Other DBs
NCBI-ProteinID:
AKT39645
UniProt:
A0A0K1EFK7
LinkDB
All DBs
Position
5051720..5054278
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AA seq
852 aa
AA seq
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MFVRESIMVGGRPLTFETGRLAKQAHGSVLVTYGETMVLVTAVCQDERPGLDFFPLTCEF
FEKSYAAGKIPGGFFKREARQRDEEILTCRLMDRPLRPLFPDGFKKDTQIIATVLSSDKL
NKADVLALTGASAALHVSDIPWGGPLAGVRVGRIDGEFIAYPTVEELERSDMDMVVACSR
DAIVMVEGGAAEATETEIIDALMFAHDTAQPIIDLIDKIRAAVGKPKREFAAPQLDEVIK
SRVAEIVDPPLSSATRVTNKKARYDGYSAIKKSLTETLLAELGPEKYLAAERLVKAEFEE
RKAHIVRTYVLDEGKRIDGRDGRSIRPIACEAGLLPRVHGSALFQRGETQAIVTTTLGTS
TDEQKVDNLMGESWKRFYLHYNFPPFSTGETKPMRGPGRREIGHGALAERALTRMIPPAD
QFPYTIRIVSETLESNGSSSMAAVCGGCLSLMDAGVPIKAPVAGIAMGLIMEGDKYAVLS
DILGDEDHLGDMDFKVCGTARGVTAIQMDIKIAGLSRLILMQALEQAREGRLHILGKMLE
TLPSSRPELSQHAPRITTFKVKPDQIRLIIGPGGKTIKGIVDQTGVAIDLEDDGTVNVAS
ADADAVRKALDIIKGLTAEPEVGATYKGTVKRVADFGAFVEILPNIDGLLHISEMAHHRV
ERVEDLFKEGDSVEVKVVSVERDGKIRLSRKELLPVPEGMPERPSRERFGRDRERPERGD
RFSRPGRPERGEGGERPVRAERSEAGERAPRFERGEGGGERPVRAERSEGQEAPPRPERG
ERPARPERPERATLRRGDTMSRRAPESHPADGGEAGVSRSAPAPEERRSSPGGDDEGHAH
GSRDPEDPTHRS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttcgggaatccatcatggtgggcggccgtccgctcacgttcgaaacaggccga
ttggccaagcaagctcacgggtcggtgctcgtcacctacggcgagacgatggtgctcgtc
acggccgtctgtcaggacgagcgccccgggctcgacttctttcccctcacctgtgaattc
ttcgaaaagtcgtacgcggctggaaagattcctggtgggttcttcaagcgagaggctcgc
cagcgggacgaggaaatcctcacctgccggctgatggatcgccccttgcgaccactcttt
cccgatgggttcaagaaggacacacagatcatcgcgaccgtcctttcgagcgacaaactc
aacaaggcggacgtccttgcgctgacgggcgcgagcgctgcgctccatgtctccgacatt
ccctggggcggccccttggctggtgtccgcgtcggtcgaatcgacggcgagttcatcgcc
tatccgaccgtggaggagctggagcgcagcgacatggacatggtggttgcctgctcgcgc
gatgccatcgtgatggtcgagggtggtgctgcggaggcgacggaaaccgagatcatcgac
gccctgatgttcgcgcacgacacggctcagccgatcatcgacctcatcgacaagatccgt
gctgccgtcggcaagccgaagcgtgagttcgccgcgccgcagctcgacgaggtgatcaag
agccgcgtcgcagagatcgtggatcccccgctctcgtcggccacccgcgtcaccaacaag
aaggcgcggtacgacggctacagcgcgatcaagaagagcctcaccgagacgctgctcgcg
gagctgggcccggagaagtacctcgccgccgagcggctggtgaaggccgagttcgaggag
cgcaaagcccacatcgtgcgaacctatgtcctcgacgagggcaagcgcatcgacggccgt
gatgggaggagcatccgtcccatcgcctgcgaagccggcctcctgccccgcgtccacggc
agcgcgctgttccagcgtggtgagacccaggccatcgtcaccaccaccctcggcacgtcg
acggacgagcagaaggtcgacaacctgatgggggagtcctggaagcgcttctacctccat
tacaacttcccccccttctcgacgggtgagacaaagccgatgcgtggcccggggcggcgc
gagatcggccatggggcgctcgccgagcgtgcgctgacgcgcatgatcccgcccgcggac
cagttcccctacacgatccgcatcgtgtcggagacgctggagtcgaacggctcgtcgtcg
atggcggcggtgtgcggtggctgtctctcgctgatggacgcaggcgtcccgatcaaggcg
cccgtcgcgggcatcgccatgggcttgatcatggaaggggacaaatacgccgtgctctcc
gacatcctcggtgacgaggaccatctcggcgacatggatttcaaggtgtgtggcaccgcg
cgaggcgtcacggccatccagatggacatcaagatcgcggggctgagccgcctgatcctc
atgcaggcgctcgagcaggcgcgcgaggggcgactgcacatcctcggcaagatgctggag
accttgccctcgtcgcgtccggaactcagccagcacgcgccgcggatcaccacgttcaag
gtgaagccggaccagatccgcctcatcatcggccccggcggcaagaccatcaagggcatc
gtcgatcagaccggtgtcgccatcgacctcgaagacgatggaacggtcaatgtggcctcg
gctgacgcagacgccgtccgcaaggccctcgacatcatcaaggggctcaccgcggagccg
gaagtgggcgccacctacaaggggacggtcaagcgtgtcgcggacttcggcgccttcgtc
gagatcctgccgaacatcgacggcctgctccacatctccgagatggcgcaccaccgcgtc
gagcgcgtcgaggacctcttcaaggaaggcgacagcgtcgaggtcaaggtggtcagcgtc
gagcgcgacgggaagatccggctgagccgcaaggagctccttcctgttccggagggcatg
ccggagcgtccttcacgggagcgcttcggtcgtgatcgagagaggcccgagcgtggcgac
cggttctcgcgaccggggcgtccggagcgtggggaagggggagagcgccccgtccgagcc
gagcgcagcgaagctggagagcgcgctccgcggttcgagcggggtgaaggcggcggagag
cgccccgtccgagccgagcgcagcgaaggccaggaagcgcctcctcgtcccgaaagaggc
gagcgacccgcgcggccggagcggcccgagcgcgcgacgttgcgtcgaggtgacacgatg
agccggagggctccggagtcgcaccccgccgacgggggagaggcaggcgtctctcgcagc
gcaccggctccggaggagcgacggtcgtcacccggtggggatgacgaaggtcatgctcac
ggatcgcgtgaccccgaagatccgacgcaccgttcctga
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