Entry |
|
Symbol |
cafA
|
Name |
|
KO |
K08301 | ribonuclease G [EC:3.1.26.-] |
|
Organism |
ccro Chondromyces crocatus
|
Brite |
KEGG Orthology (KO) [BR:ccro00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ccro03019]
CMC5_076320 (cafA)
03009 Ribosome biogenesis [BR:ccro03009]
CMC5_076320 (cafA)
Messenger RNA biogenesis [BR:ccro03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CMC5_076320 (cafA)
Ribosome biogenesis [BR:ccro03009]
Prokaryotic type
rRNA processing factors
CMC5_076320 (cafA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
10329282..10332023
|
AA seq |
913 aa
MAKNLLVINVDIRETRVALIENGIIAELHIERESSTGTLGNIYLGKVSRVLPGMQAAFIE
VGLERAAFLHVEDLIRPDDFEAYLAGRRHPSSEEARGGRRAWAPRPGEPHVHVEEPDDDL
PHLEASESEAEEVFSAPLEHQREGEVEASIALPTALDVLEDSSSGETDEEQGPFVGLETL
DASGDVDVDREDTDLAPSSEGDDDALEASGALAPASDSDAATESVESTEPVEAAEQDAEE
SQAPSAPSDDDDVERGNLSPQDAGVDRQGQDPDASAAPDVDADGTSGDDAALPGYETEPS
LAQASTAAPSSEDVTSAEDETSGAAQELSSSDALLVTTPSDAEPSLEGAPDASVDAGATT
EEVPSVARARSGRTRSRREGRVRRSGRTRDRRAEIGAETEAAPPQERPVGSGERPEGARE
RSSGREGGRERAATPEATREGRETREGRDKEQPRGREGRGKGRERSREGRDREQPRGRDG
RERGRESREAEARNRTPARARSNEPPRISKSTPIREVIREGQEIIVQISKEPIGTKGARV
TSHVSLPGRYVVYLPTVDHIGISKRIGSEKERSRLRESIESMKPPQGGLIVRTLAEGLTK
KQLKADVGYLVRLWGEIAKKRESGIRAPTVLYTELDLVLKTARDLFTDDIEKIVIDDRDE
YMRLKRFVEMFMPERADAVEYYDGEEPIFDAYGIEDEIQRALARKVPLPSGGYLIIDQAE
ALTAIDVNTGRFVGKGSKDLEETILATNLEAVEEIAYQLRFRNIGGLIILDLIDMERAQN
REKVRKRLEDLLARDKAKTTLNRISDLGLIEMTRKRTRESLGQMILEPCFYCDGTGQLQS
KQTVAYEILRQIRRERHHLPGYSVVVNAHPAVIDLLKSDERVAVMEAERLFQRRIDLVPR
KEYHLEQFDLQGR |
NT seq |
2742 nt +upstreamnt +downstreamnt
atggctaagaatctcctcgtaatcaatgtcgacatccgcgagacccgggtcgcgctgatc
gagaatgggatcattgccgagctgcatatcgaacgggagagctccacgggaactctcggt
aacatctacctcggcaaggtgagccgcgttctgccgggtatgcaggcggcattcatcgaa
gtgggactggagcgcgcggcgttcctccacgtcgaagatctcatccgaccagacgacttc
gaagcttacctggcgggacggcgccacccatcaagcgaagaagcgcgcggtggacggcga
gcctgggcaccacgcccgggcgaaccccacgtgcacgtggaagagcctgatgatgacctg
ccacacctcgaagcctccgaatccgaggccgaggaggtgttttccgcgccactcgaacac
cagcgggaaggagaggtcgaagcttcgatcgctctgccaacagcgctggacgtgctcgaa
gattcctcttcgggcgaaacagacgaagaacaaggaccgttcgtcggcctggaaaccctc
gatgcttcaggcgacgtcgatgtcgaccgcgaagacaccgacctggcaccaagcagtgaa
ggggacgacgacgccctcgaggcaagtggcgcgctggcccccgcctcggacagcgacgcg
gccacggaatctgtagagtctacagagcctgtagaggctgcagagcaggatgctgaagag
tctcaggctccgtccgcgccgagcgacgacgacgatgtagaaagaggtaacctctctccg
caagacgcaggggtcgaccggcaaggccaggatccagacgcgagcgccgctcctgacgtc
gacgcggacggcacttctggcgacgacgctgcgctcccgggatacgagaccgagccttcc
ctggcccaggcctcgacagcggcgccctcgtcagaggatgtcacttcggcggaagacgag
acgtcgggcgctgcgcaggagctttcctccagcgacgcgctcctcgtcacgacgccatca
gacgcggagccctcgctcgaaggagccccagacgccagtgtcgacgctggtgccaccacc
gaagaggtcccctccgtcgcgcgcgcccgctcggggaggacgcgctcacgccgtgaaggc
cgcgtccgccgatccggaaggacccgcgatcgccgtgcagagatcggcgcggagaccgaa
gcagcccctccgcaggagcggcctgtcggcagcggagagcgtcccgagggagcccgcgag
cgctccagtgggcgcgagggcggccgagaacgcgctgccacgccggaggcgacgcgcgaa
ggtcgggagacgcgcgaaggtcgggacaaagagcaaccgcggggacgcgaggggcgcggc
aaggggcgcgagcgctcacgcgaagggcgcgaccgcgaacaaccgcgaggcagagacgga
cgcgagcgaggccgggagagccgtgaagccgaagcacggaaccgtacccccgcccgggcg
cgctccaacgaacccccccgcatctccaagtcgacgccgatccgggaagtgatccgcgaa
ggccaggagatcatcgtccagatctccaaggagccgatcggcaccaagggcgcgcgggtg
accagccacgtctccctcccgggccggtacgtcgtctaccttcccacggtcgaccacatc
ggcatctccaagcgcatcggctccgagaaggagcgctctcgcctgcgcgagtcgatcgag
tcgatgaagcccccgcaaggcggcctcatcgtgcgcacgctcgccgagggcctcaccaag
aagcagctcaaggccgacgtcggctacctcgtgaggctgtggggcgagatcgccaagaag
cgcgagagcggcatccgtgcccccacggtgctctacacggagctggatctcgtcctcaag
acggcccgtgatctgttcacagacgacatcgaaaagatcgtcatcgacgatcgcgacgag
tacatgcgcctcaagcgcttcgtcgagatgttcatgccggagcgcgccgacgccgtggag
tactacgacggcgaggagcccatcttcgacgcctatggcatcgaggacgagatccagcga
gcgctggcccgcaaggttcccctcccctccggcggctacctgatcatcgaccaggccgag
gcgctcaccgccatcgacgtcaacaccgggcgcttcgttggcaagggctcgaaggacctc
gaagagacgatcctggccaccaacctcgaagcggtggaggagatcgcctaccagctccga
ttccggaacatcggcggcttgatcatcctcgacttgatcgacatggagcgtgcgcagaac
cgggagaaggtccgcaagcgcctcgaagatctcctcgcccgggacaaggccaagaccacc
ctgaaccgcatctccgatctcggcctcatcgagatgacccggaagcggacgcgggagagc
ctggggcagatgatcctcgagccctgcttctactgcgacggcaccggccagctccagtcg
aagcagaccgtcgcctacgagatccttcgccagatccgcagggagcgacaccacctcccg
ggctactcggtcgtcgtgaacgcccacccggcggtgatcgacctcctgaagagcgatgag
cgtgtggcggtgatggaagccgagcggctcttccagcgccggatcgatctcgtcccgcgc
aaggagtaccacctcgagcagttcgatctgcagggcaggtaa |