Crocuta crocuta (spotted hyena): 144216934
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Entry
144216934 CDS
T11532
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
144216934 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccru03036
]
144216934 (ERCC6)
03400 DNA repair and recombination proteins [BR:
ccru03400
]
144216934 (ERCC6)
Chromosome and associated proteins [BR:
ccru03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
144216934 (ERCC6)
DNA repair and recombination proteins [BR:
ccru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
144216934 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
144216934
NCBI-ProteinID:
XP_077602509
LinkDB
All DBs
Position
Unknown
AA seq
1482 aa
AA seq
DB search
MQNAIIPHASQPQEQDCLRSQFVSDKQEMTIKQENDGSAEVEESLPSCSSANGPSTSAEG
CSSEVLRRGPAPLHIDRHQIQMVELSAQALELQGLGVDVYDQDVLEQGVLRQVDSAIHEA
SRAAQLADAEKEYRSVLDDLTSCRTSLRQINKIIEQLSPQAATNRDVSRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILGGAEVQVEIDHAGLEEEDTEPGPSCLGSMLMPVQETAWEEL
IRTGQMTPFGTQIPQKQEKKPRKLMLDEASGFEKYLADQAKLSFERKKQASNKRAARKTA
ASGSSELSTTLSGNKPSERSKVLSKTDKRLKKHIKKLQKKALHFQGKVGLPRGKKPLEAD
VRPKAEGTSEGEESEYLPTEEEQEEAEGAELIGEGPDCALKAVLKHRKRQKKVTGPEIED
DFFPSSGEEAEATCGGGGRKVVRCRDDGDEDYYKQRLRRWNNLRLRDKEKCLKLEGDSEE
SDAEFDDFKIPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGL
SYSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEK
LIRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPH
RIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYK
CACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQQKVYQNFIDSKEVYRIL
NGDMQIFSGLVALRKICNHPDLFSGGPKNLRGIPDDELEEDQFGYWKRSGKMIVVESLLK
IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDASIFV
FLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIE
EKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDASQSTETSAIFAGTGSDV
QTPKRLLKRKLPPASGTDPNVSTCKKFPDSNASANDAASSGEKSAVTGAEVNAVTSDQGD
PLKVPPQTPRDLPGGDGPGKETSAVSRLEESSVISGHGECSDSPGVSKTDGLCSEESIHE
NQGLSDKRESCQAPTEPLWEDKQMENNCYKHKSKTKHSAPEEETLEHHRQLKQKPKNSKH
HRDAKFEGTRIPHLVKKRRYRKQGSENENETSERSNDDYVLEKLFKKSVGVHSVMKHDAI
MEGANPDYVLVEAEANRVAQDALKALRLSRQWCLGAVSGVPTWTGQRGVSGAPAGIKSRF
GQKRNSNFSVQHPSSTSSREKCQDGVMRKDGKDNASEHFSGKVEDGESSPGALPSSSLLA
KMRARNHLILPERLESDSAHQEASAPPPATTEHDDLLVEMRNFIAFQARVDGQASTQEIL
QEFESKLSASQSCVFRELLRNLCTFHRTSSGEGIWKLKPEYC
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgcgataatcccccacgcaagtcaacctcaggagcaagactgtttacggagt
cagtttgtcagtgataaacaagaaatgacaatcaagcaagaaaatgatggcagtgcagag
gtggaggaaagcctcccctcttgttcctctgctaatggaccatccacttctgccgagggc
tgttcatcagaagttctgaggagagggccagccccgctgcacatcgacaggcatcagata
cagatggtggagctgagtgcgcaggcccttgaactgcaggggttgggtgtggatgtgtat
gatcaggacgtgctggaacagggtgtgcttcggcaggtggacagtgccattcatgaggcc
agccgtgcggcccaactggctgatgcagagaaggagtatcgatcagtcctggatgacctc
acgtcatgtaggacatcactaaggcaaatcaataaaattattgaacaacttagccctcaa
gctgccaccaacagagacgtcagcaggaaactagattccgtaaaacgacagaagtataat
aaggaacaacagttaaagaagatcacagcaaaacaaaaacgtctccaggccatccttgga
ggagcagaggtccaagttgaaatagatcatgctggtctagaggaggaggatacagaaccc
gggccgtcctgtctcggcagcatgctcatgcctgtccaggagactgcttgggaagagctc
atccgcactggccagatgacaccttttggaacccaaatccctcagaaacaggagaaaaag
cctagaaaactaatgctcgatgaagcatcaggctttgaaaagtatttggcagatcaagca
aaattgtcttttgagaggaagaagcaagctagtaataaaagagcagctaggaaaactgcg
gcctcaggctcttctgagctgagcacaacactcagtggaaacaaaccaagtgagcgaagc
aaagttctctcaaaaacagataagcgcttgaaaaagcacatcaagaagcttcagaaaaag
gctcttcatttccaggggaaagtgggtttgccaagaggaaagaaacctttggaggccgac
gtgaggccaaaggccgagggcacctctgaaggcgaagagtctgaatacctccccacggag
gaggagcaggaggaggccgagggggctgagctgattggagaaggccctgactgtgcgctg
aaagccgtgctcaagcaccggaaacggcagaaaaaagtcacgggaccggagatcgaggat
gacttttttccaagttctggggaagaagcagaagccacctgtggaggaggaggtcggaaa
gtagtgagatgccgagatgatggagatgaagattattataagcagcggttaaggagatgg
aataatctgaggctgcgggacaaagagaagtgtctgaagcttgaaggcgattctgaggag
agcgatgccgaatttgacgattttaaaatcccgggttttctgttcaaaaagctttttaag
taccagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcaggaggaatt
ctgggagacgaaatgggattgggcaagaccatccagataattgccttcttggcaggtctg
agctacagcaagatcaggactcgtggttcaaattacaggttcaaggggttgggtccgact
ataatcgtctgtccaacgacagtgatgcatcagtgggtgaaggaatttcacacgtggtgg
cctccgttcagagtggcaattctgcatgaaactggctcctatactcacaaaaaggagaaa
ctaattcgagatattgctcattgtcatggcattttgatcacttcttactcctacattcgg
ctgatgcaagatgacattagcagacatgactggcactacgtgatcttggatgaggggcac
aaaattcgaaatccaaatgctgctgtcacccttgcttgcaaacagttccgcacccctcat
cgcatcatcctttctggctcaccgatgcaaaataacctccgggagctgtggtctctcttt
gacttcatcttcccagggaagttaggcacgttgcctgtgttcatggagcagttctccgtc
cctatcaccatggggggatattcaaatgcctccccagtacaggttaaaactgcttataag
tgtgcatgtgtcttacgagataccataaatccatacctactgcggagaatgaagtcagat
gtcaaaatgagcctttctttgccagataaaaatgaacaggtcctattttgccgtcttaca
gaggagcaacaaaaagtctaccaaaattttattgattccaaagaagtttacagaattctc
aatggagatatgcagattttctctggacttgtagccctaagaaaaatctgcaaccaccct
gacctcttttctggaggtcccaagaatctcagaggtattccagatgatgaactagaagaa
gatcagtttggatactggaaacgttctgggaaaatgatagtagttgagtccttgttgaaa
atatggcacaaacagggtcaacgagtattgctgttttctcagtcaagacaaatgttggat
atacttgaagtattccttagagcccaaaagtattcttacctcaagatggatggtaccact
gcaatagcttcaagacaacctctgattacaagatacaacgaggatgcatccatatttgtg
tttcttctgaccactcgggtgggtggcataggtgtcaacctgacgggggcaaacagagtc
atcatctatgatcccgactggaaccccagcacagacacacaggcccgggagcgagcatgg
aggataggccagaagaagcaggtgacggtgtacaggctgctgactgcaggcaccattgaa
gaaaagatttaccaccggcaaattttcaagcaatttttgacaaatagagtgctgaaagat
ccgaagcaaaggcgatttttcaagtccaacgatctttatgagctgttcactctgacgagc
cctgatgcatcccagagcactgaaacaagtgctatttttgcaggaactggatcagatgtt
cagactcccaaacgccttttaaaaagaaaacttccgccagcctctgggacagaccctaat
gtttcaacatgcaaaaagttccctgattctaatgcatctgcaaacgatgctgcctcatct
ggagagaagtctgcagttacaggagctgaagtaaatgcagtaacatcggatcaaggtgat
cctttgaaagttcccccccaaacgcctagagatctgcctggtggtgacgggcctggaaaa
gagacgagtgcagtgtccagactagaggagtcgtcagtgatcagtggacatggagaatgt
tcagattctccaggagtcagcaaaacagatgggctgtgtagtgaggaaagcatccatgaa
aaccaaggtctttctgacaaaagagaaagctgccaggctccaacagagcctctttgggag
gataagcaaatggaaaataattgttataagcacaaatctaaaacaaaacacagtgcacca
gaagaagagaccctggagcaccatcggcagctgaagcaaaagcccaagaactcgaagcat
cacagagatgccaagtttgaaggaactcgaattccacacctagtgaagaaaaggcggtac
cggaagcagggcagtgaaaatgagaatgagaccagtgagcggagcaatgacgattatgtc
ttggaaaagcttttcaaaaagtcagttggcgtgcacagtgtcatgaaacacgatgccatc
atggagggagccaatccagattatgtgctggtggaggcagaggccaaccgcgtggcccag
gatgccctgaaagcgctaaggctctctcgtcagtggtgtctgggagcagtgtctggtgtt
cccacctggacgggccagcggggggtttctggtgcaccagcaggaataaagagtagattt
ggtcagaaaaggaattccaacttctctgtgcagcatccttcttcaacatcttcaagggag
aaatgccaggatggcgtcatgagaaaggatggaaaggataatgcgtctgagcacttcagt
gggaaagtggaagatggagagtcttcacctggggccctcccttcatcttcactgttggct
aaaatgagagctaggaaccacctgattctgccagagcggctggaaagtgacagtgcccac
caagaggcatctgctccaccacctgccaccacggaacacgatgacctgctggtggaaatg
agaaacttcattgctttccaggcccgtgttgatggccaggccagcactcaggagatactg
caggagttcgaatccaagttatcagcctcacagtcttgtgtctttcgagaactattgaga
aatctgtgcacttttcatagaacttctagtggtgaagggatttggaaactcaagccagaa
tactgctaa
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integrated database retrieval system
