Crocuta crocuta (spotted hyena): 144217929
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Entry
144217929 CDS
T11532
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144217929 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccru03041
]
144217929 (DHX8)
Enzymes [BR:
ccru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
144217929 (DHX8)
Spliceosome [BR:
ccru03041
]
Complex C
Other components
Step II factors
144217929 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
Sigma54_activ_2
PhoH
TsaE
nSTAND_NTPase5
OB_RRP5_4th
ABC_tran
Motif
Other DBs
NCBI-GeneID:
144217929
NCBI-ProteinID:
XP_077603829
LinkDB
All DBs
Position
Unknown
AA seq
1226 aa
AA seq
DB search
MAVAVALAGAVPGTELGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTGKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAAQEKQRDAEHRDKAKKKKRSRSR
DRDRDRDRDRERDRERERDRDRDHKRRHRSRSRSRSRTRERNKGKSRYRSRSRSQSPPKD
RKDRDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL
VHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL
VGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKE
EFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQ
AAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPND
IPEWKKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGK
TTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSP
ETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLI
VTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPG
DILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK
VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT
GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETL
ITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSV
QNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR
AQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVY
IHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKK
QQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggctgtggccctggcgggggccgtgcccggaacggagctaggccccgcagaa
gaactcgccaaactcgagtatctgtctttagtgtcgaaagtttgcaccgagctggacaat
cacttggggatcaacgacaaggatctggctgaatttgtgatcagtcttgccgagaaaaat
actacctttgatactttcaaggcttctctggtcaaaaatggtgccgaattcacggattct
cttatcagtaacttgctgcggctcatacagaccatgcggcctccagcaaagccttcgacc
agcaaagatcccgtcgttaagcccaaaactggaaaagaaaagctgaaggagctcttccca
gtgctttgccaaccagacaacccttctgtccggaccatgctggatgaggatgatgtgaag
gtcgctgtggatgtcctgaaagaactggaagccttaatgcccagtgcagcggcccaggag
aagcagagagatgctgagcaccgagacaaggcaaagaagaagaagcggagccggagccgt
gaccgcgaccgtgatcgtgaccgcgaccgagagcgggaccgggagcgggagcgcgaccgt
gatagggaccacaagaggagacaccggtcccgctctcggtcacgttccaggacccgggag
aggaacaaagggaagtctagatatcggtctaggagcagaagtcagagtccccccaaagac
cggaaggaccgggacaagtatggggagaggaatctggacagatggcgggataaacatgtg
gaccgccctcccccggaagagcccgccattggggacatttacaatggcaaagtgaccagc
atcatgcagtttggctgcttcgtgcagctggagggattaaggaagcggtgggaaggcctg
gtgcacatctccgagctccggcgggaaggccgggtggccaatgtggctgatgtggtgagc
aaaggccagagggtcaaagtcaaagtgctgtccttcactgggaccaagaccagtctgagc
atgaaggatgtggatcaggagactggtgaagatctaaaccccaatcgacgtcgaaatctc
gtcggggagaccaatgaggagacctcaatgaggaatccagacagacccactcacctctcc
ctcgtcagcgcccctgaagtagaggatgactcgctggagcgcaagcgccttacccgaatc
tctgacccagagaagtgggagatcaaacagatgattgctgccaacgtcctttccaaagaa
gagtttccagactttgatgaagagacgggcattctccctaaagtggatgatgaagaagat
gaagatcttgagatcgagctggtcgaggaagagcctccattcctgagaggacacaccaag
caaagcatggacatgagccctatcaaaatcgttaagaacccagatggctccctctcccaa
gcagcaatgatgcagagtgctctggccaaagaaaggcgggaactcaagcaggcccaacgg
gaagctgagatggattccattcccatggggctcaacaaacactgggttgatcctctgcct
gatgcggaaggcagacagattgctgccaatatgaggggtatagggatgatgcccaatgac
attcccgagtggaagaagcatgcttttgggggcaacaaagcctcttacggaaaaaagacc
cagatgtcaatcattgaacagagagagagcctgcccatttacaaactgaaggagcagctg
gttcaggctgtccacgacaatcaaatcctgattgttattggagagacggggtctgggaag
accacgcagatcacccagtacctggcagaggcgggctacacttcccggggcaagattggg
tgtacccagccccgaagagtagccgccatgtcggtggccaagagagtttcggaagagttt
ggttgttgcttaggccaagaggtgggctacaccattcgatttgaggactgcaccagccca
gaaacagtcatcaaatacatgacagacgggatgctgctccgagagtgcctgattgacccc
gacctcacacagtatgcaatcatcatgttggacgaggcacacgagagaaccattcatacc
gacgtgctctttggattgttgaagaagacggttcagaaacggcaggacatgaagctgatt
gtcacctcagccacgttggatgcggtgaagttttctcagtacttctatgaagcccccatc
ttcaccatcccaggtcggacatatccggtggaaatattgtacacaaaggagcctgagaca
gattatctggatgccagtttgatcactgtcatgcagatccacttaacagagccgccaggg
gacatcctggtcttcctgacgggtcaggaggagatcgataccgcgtgcgagatcctgtac
gaacgaatgaagtccctgggacccgatgtcccagagctgatcatcctgccagtgtactct
gctcttcccagtgaaatgcagacccgaatctttgacccagctccccctggcagcagaaag
gtcgtgattgccaccaacattgcagagacctcgctgaccattgacggcatctactatgtg
gtggaccctgggtttgtgaagcagaaagtctacaattccaagaccggcatcgaccagctc
gtggtcaccccgatctctcaggctcaggcaaagcagcgagcgggcagagctgggaggacg
ggcccagggaagtgttacaggctgtacacagaacgtgcctaccgagacgagatgctgacc
accaacgtgccggaaatccagaggaccaacctggcgagcaccgtgctctccctcaaggcc
atgggcatcaatgacctgctgtcctttgacttcatggacgcccctccaatggaaaccttg
atcacagccatggagcagctgtacacgctgggggccttggatgatgagggcctgcttact
cgcctgggccgcaggatggcagaattccctctggagccaatgctgtgcaaaatgctgatc
atgtccgtgcatctcggctgcagtgaggagatgctgaccatcgtatccatgctgtctgtg
cagaatgtcttctacaggcccaaggacaaacaagcccttgcagatcaaaagaaagctaaa
ttccaccagactgaaggggaccacctcaccctgctggccgtgtacaactcctggaagaac
aacaagttctcgaacccctggtgctatgagaacttcatccaggcccgttcgctgcgccgg
gcccaggatatccgcaagcagatgctgggcataatggacagacacaagctggatgtggtc
tcctgtggcaagtccacagtccgagtacagaaggccatctgcagtggattcttccggaat
gctgccaagaaagacccgcaggaaggctaccggacactgattgaccagcaggtggtctac
atccacccttccagtgctctcttcaataggcagccggaatgggtggtgtaccatgagctg
gtgctgaccacaaaggagtacatgcgtgaggtcaccaccatcgacccccggtggcttgtg
gagttcgctcctgccttcttcaaggtctctgacccgaccaagctaagcaagcagaagaag
cagcagcgccttgaacccttgtacaaccgctacgaggagcccaatgcttggagaatatcc
cgggccttccggcggcgctga
DBGET
integrated database retrieval system
