Crocuta crocuta (spotted hyena): 144220057
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Entry
144220057 CDS
T11532
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03008
Ribosome biogenesis in eukaryotes
ccru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
144220057 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
144220057 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccru03021
]
144220057 (XRN2)
03019 Messenger RNA biogenesis [BR:
ccru03019
]
144220057 (XRN2)
03009 Ribosome biogenesis [BR:
ccru03009
]
144220057 (XRN2)
03016 Transfer RNA biogenesis [BR:
ccru03016
]
144220057 (XRN2)
Transcription machinery [BR:
ccru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
144220057 (XRN2)
Messenger RNA biogenesis [BR:
ccru03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
144220057 (XRN2)
Ribosome biogenesis [BR:
ccru03009
]
Eukaryotic type
Pre-60S particles
RNases
144220057 (XRN2)
Transfer RNA biogenesis [BR:
ccru03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
144220057 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
144220057
NCBI-ProteinID:
XP_077606307
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFSPGGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSVSPNTSF
TSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETKRNSLGGDVLFVGKHHPLHDFILELYQTGSTEPVDVPPELCHGIQG
KFSLDEEAVLPDQIVCSPVPMLRDLTQNTAISINFKDPQFAEDYIFKAVMLPGARKPAPV
LKPSDWEKSSNGRQWKPQLGFSRDRRPVHLDQAAFRTLGHVMPRGSGAGVYGNAAPPPAT
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccggctttctttcgctggcttagccgcaagtacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtcaagattcctgttgatgccagtaaa
ccaaatccaaatgatgtggagtttgataatctctacttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaagccagcaccgaaaaatgaggatgaaatgatggttgca
atttttgagtacattgacaggcttttcaatattgtgagaccaagacgacttctctacatg
gcaatagacggagtggcaccacgtgctaaaatgaaccagcagcgttccaggagattcaga
gcatccaaagaaggaatggaagcagcagtggagaagcagcgagtcagggaagaaatactg
gcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgacagcaactgtatt
acacctggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaacttgacagttattttatctgatgctagtgct
cctggtgaaggagaacacaaaatcatggattatattagaagacaaagagcccagcctaac
catgacccaaacactcatcattgcttatgtggagcagatgctgatctcattatgctcggc
cttgctacacacgaaccgaactttaccatcattagagaagaattcaaaccaaacaaaccc
aaaccatgtggtctttgtaatcaatttggacatgaggtcaaggactgtgaaggtttgccc
agagaaaagaagggaaagcatgatgaacttgcagatagtcttccttgtgcagaaggagaa
tttatcttccttcgtcttaatgttcttcgtgagtatttggagagagagctcaccatggcc
agcctaccattcacatttgatgtcgagaggagcattgatgactgggtcttcatgtgcttc
tttgtgggaaatgacttccttcctcatctgccatcattagaaattagggaaggtgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttctctcctggtggaatattaacccca
catgccttgggttcaagaaattcaccaggttctcaagttgccagtaatccgagacaagca
gcctatgaaatgaggatgcagaataactctagtccttcagtatctcctaatacaagtttc
acttctgatggctctccgtctccaataggaggaattaagcgaaaagcagaagacagtgac
agtgaacctgagccagaggataacgtcaggctgtgggaagctggttggaagcagcggtac
tacaagaacaaatttgatgttgatgcagctgatgagaaattccgtcgtaaagttgtacag
tcttacgttgaggggctctgctgggttcttcgatattattaccagggctgtgcttcctgg
aaatggtattatccattccattatgcaccatttgcttcagactttgaaggaattgcagac
atgccatctgattttgagaagggcactaaaccgtttaaaccactggaacaacttatggga
gtttttccagctgcaagtggtaactttctacctccatcatggcggaagctcatgagtgat
cctgattctagtataattgacttctatcctgaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctcttgccttttgtggatgagcgaaggctgcgagct
gctctagaagaggtgtacccagacctcactccagaagagactaaaagaaacagtcttgga
ggtgacgtcttatttgtggggaaacatcacccactccacgacttcattttagagctctat
cagacaggttccacagagccagtggacgtaccacctgaactatgtcatggaattcaagga
aagttttctttggatgaagaagccgttcttccagatcaaatagtatgttctcctgtcccc
atgttacgagatctgacacagaacactgcaatcagtattaattttaaagacccacagttt
gctgaagactacatttttaaagctgtaatgcttccaggagcaagaaaaccagcaccagta
ctgaaaccgagtgactgggaaaagtccagcaacggacggcagtggaagccccaacttggc
ttcagtcgggaccggaggcctgtccatctggatcaggctgcattcaggactttgggccat
gttatgccaaggggctcaggggctggcgtttacggcaatgctgcaccaccacctgcgacc
tatcagggaaatttatacaggccactgttgagaggacaagcccagattccaaaactcatg
tcaaatatgaggccccaggattcctggcggggtcctcctccccttttccagcagcaaaga
tttgacagaggagttggggctgaacctctgctgccatggaaccggatgctccaaacccag
aatgcagccttccagccaaaccagtaccagatgctagctggacccggcgggtatccaccc
agacgcgatgaccgtggagggagacagggatatcccagagaaggaaggaaataccctttg
ccaccaccctcaggaagatacagttggaattag
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