Crocuta crocuta (spotted hyena): 144220641
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Entry
144220641 CDS
T11532
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
144220641 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccru03021
]
144220641 (CPSF3)
03019 Messenger RNA biogenesis [BR:
ccru03019
]
144220641 (CPSF3)
Transcription machinery [BR:
ccru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
144220641 (CPSF3)
Messenger RNA biogenesis [BR:
ccru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
144220641 (CPSF3)
U7-dependent histone pre-mRNA processing factors
144220641 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
144220641
NCBI-ProteinID:
XP_077607061
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEILNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSVLSVTVDGKTANINLETRTVECEEGSE
DDESLREMVELAVQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggaaagtgaccagctgctgatccggccccttggagccggg
caagaagtaggaagatcatgtattatcctggagttcaaaggaagaaaaataatgttggac
tgtggaatccaccctggcctagaaggaatggacgcccttccttacattgatttaattgac
ccagctgagattgatctcctgttaattagtcatttccatctggatcactgtggggctttg
ccctggtttctacagaagacgagtttcaaaggaagaacatttatgacccatgcaacaaaa
gctatttatagatggcttctctcagattatgtcaaggttagtaacatatcagcagacgac
atgctgtatacggaaacagatttggaagagagcatggacaaaatcgaaaccatcaacttt
catgaggttaaagaagttgcaggaatcaagttctggtgttaccatgcaggccacgttctc
ggagctgccatgttcatgattgagatcgcgggcgtgaagcttttgtacacaggtgatttc
tcaagacaagaagatagacacttaatggcagctgaaattctaaatattaaacctgacatt
ctcattattgaatctacatatgggacccacatccatgagaagcgtgaagaacgagaagca
agattctgtaacactgttcatgatatagtcaacagagggggcagaggcctcattcctgtc
tttgcccttggaagggctcaggagctgctcttgatcttagatgagtactggcagaatcac
ccagaactccatgacattcccatatactacgcgtcgtctttggctaagaagtgcatggca
gtgtaccagacgtacgtaaacgccatgaatgacaaaatccggaaacagatcaacatcaac
aacccctttgtgttcaagcacatcagtaacctcaagagcatggaccattttgatgacatc
ggtcccagtgtcgtcatggcctccccgggcatgatgcaaagtggcttatccagagagctc
ttcgaaagctggtgcacggataagaggaacggcgtcatcatagcagggtactgtgtggaa
gggacacttgccaagcatatcatgtctgaaccagaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtctgttgattacatttctttctctgctcacacagattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccatggagaa
caaaatgaaatggccaggttgaaagcagccctgattcgagaatatgaagataacgatgaa
gttcacatagaggttcataatcctcggaatacagaagctgtgactttgaatttcagagga
gaaaagctagccaaggtcatgggctttttagcagacaaaaaaccagaacaaggccagcgg
gtctcaggaatacttgttaagagaaactttaattatcacatactttctccttgtgacctc
tccaattatactgacttggccatgagcactgtgaaacagacccaagccattccatatacc
ggcccttttaatttgctctattaccagctacagaagttgacaggtgatgtggaagaatta
gaaattcaagaaaaacctgctctgaaagtattcaaaaatattactgtaatacaggaacca
ggaatggtggtattagaatggttagcaaacccttccaacgacatgtatgcggacacagtg
accaccgtgatcctggaagttcagtcaaacccgaaaataaggaaaggtgcagtacagaag
gtttccaaaaagctagaaatgcatgtttatagcaaaaggttggagatcatgctgcaggac
atatttggagaggactgcgtgagtgtgaaagacggttccgttctcagcgtcacagtagat
gggaaaactgcaaatataaacctggagacacggactgttgaatgcgaagaaggaagcgag
gacgacgagtcgctccgggagatggtggagctggccgtgcagagactctacgaggcgctc
acgccggttcactga
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integrated database retrieval system
