Crocuta crocuta (spotted hyena): 144222550
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Entry
144222550 CDS
T11532
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03013
Nucleocytoplasmic transport
ccru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
144222550 (UPF3B)
03015 mRNA surveillance pathway
144222550 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccru03019
]
144222550 (UPF3B)
Messenger RNA biogenesis [BR:
ccru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
144222550 (UPF3B)
mRNA cycle factors
P-body specific factors
144222550 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
144222550
NCBI-ProteinID:
XP_077609184
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKEEKDHRPKEKRVTLLTPPGATGSSGGASKQDRNKEKKEALSKVVIRRLPPTLTKEQLQ
EHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYP
AIVEFAPFQKAAKKKTKKRDTKVGXPLSWANPEYRKFLESYAADNEKMTSTPETLLEEIE
AKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEEKRKRKD
IEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLXEEKELDKREKAKKLDKENLND
ERASGQSCALPKRSDGEPKDEKPKRPEDESGRDYRDRDRDRDRDRDRDRRKEDEMKKEKE
AVRDKGKKAESTESVGSSEKTEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDS
TKCGDSGIEKKQESGISHRKEGGEE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggatcataggcctaaagagaagcgagtaaccctgttgactcccccg
ggggccacgggcagcagcggtggagcctcnaagcaggatcgaaataaggagaagaaggag
gcgctgagcaaggtggtcattcggagattacctcccactttgaccaaggagcagctgcag
gaacaccttcagcctatgccagagcatgattattttgagttcttttctaatgatactagt
ctgtatcctcatatgtatgcgagagcatacatcaactttaaaaaccaagaggacattatt
ttgttcagggatcgctttgatggttatgtattccttgacaataaaggtcaggaatatcct
gccatagtagaatttgcaccttttcaaaaagctgcaaaaaagaagactaagaaaagagat
accaaagttggganccctctctcttgggctaatccagaatataggaaatttttggaaagt
tacgctgcagataatgagaaaatgacatctactccggagacactgctagaggaaatagaa
gcaaaaaatagagaattaatagctaaaaagacaaccccacttttgagcttcctgaaaaac
aagcagagaatgagagaagaaaagagagaggaaaggaggcggcgagaaatagaaagaaaa
aggcaaagagaagaagagaggaggaaatggaaagaagaagaaaaacgaaaaaggaaagac
atagaaaagctaaagaagatagaccgagttccagagagggacaaattaaaggacgaacca
aagataaaggtacacaggtttctgttacaagctgtgaatcagaaaaatctactcanagag
gaaaaagaattagacaaaagagaaaaagccaagaaactggacaaagagaatctgaatgat
gaaagagccagcgggcaaagttgtgcactgcccaagcgctctgacggcgagcctaaagac
gaaaagcctaagaggcccgaagatgagagcggcagagactaccgggaccgggacagggac
cgcgaccgggaccgcgaccgcgaccgnaggaaggaagatgagatgaaaaaagagaaagaa
gcggttcgggacaaaggaaagaaggccgaaagcaccgaatccgtaggcagctccgaaaag
actgaaaagaaagaggaagtggttaagagagatcgcataagaaacaaggatcgcccagca
atgcagctttaccagccgggggcccgaagccgcaatcgactctgtccgcctgacgacagc
accaagtgtggagactcgggaatagaaaagaagcaggaaagtggtattagccataggaaa
gaaggaggcgaggagtga
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