Crocuta crocuta (spotted hyena): 144222951
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Entry
144222951 CDS
T11532
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03082
ATP-dependent chromatin remodeling
ccru05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
144222951
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
144222951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccru03000
]
144222951
03021 Transcription machinery [BR:
ccru03021
]
144222951
03036 Chromosome and associated proteins [BR:
ccru03036
]
144222951
Transcription factors [BR:
ccru03000
]
Eukaryotic type
Helix-turn-helix
ARID
144222951
Transcription machinery [BR:
ccru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
144222951
Chromosome and associated proteins [BR:
ccru03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
144222951
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
ARID
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
144222951
NCBI-ProteinID:
XP_077609786
LinkDB
All DBs
Position
Unknown
AA seq
1788 aa
AA seq
DB search
MIPAAGGTASAPSPSVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFG
EDDDEVPPGNPKPQLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLS
GLPNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKE
KTDRDFVKFWKDIVDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVL
QIAVILRNLSFEEGNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPV
DFKTTHLMFHTVTKCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHL
TLPDVLLVISTLEVLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKL
VEHPSSSHQVLSEIRPQAVEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQW
LNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSS
SNGQAHIHVVGVKRRAIPLPVQMYYQQQPVSTPVVRVDSVPDVSPSPSPAGIPHGPQTVG
NHFQRTSVTNQSSNLTATQMSFPVQGVHTVAQTVSRIPPNPTVHTHQQQNAPVTVIQNKA
PIPCEVVKATVIQNSLPQTAVPVSIAVGGGAPQSSVVQNHSTGPQPVTVVNSQTLLHHPS
VIPQQSPLHTVVPGQIPSGTPVTVIQQAVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQ
PVQTSSQPTSAGSQPQDTVIIAPSQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQ
PSRVGFQNIAPKPLPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIV
LANPAALPAGQTVQLTGQPSITPSSSPSPAPATNNQVPAAMSSSSTPQSQGPPPTVSQML
SVKRQQQQQHSPAPSPQQVQVQVQQPQVQMQVQPQQTNAGVGQPASGESSLIKQLLLPKR
GPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTSAQQLLVGQQNVQ
LVQSAMPPAGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVS
QGNATQLIAPAGITMSGTQAGVGLQVQTLPATPTSPAGQSSCTTATPPFKGDKIICQKEE
EAKEATGLHVHERKIEVMENPSCRRGATNTSNGDTKENEMQVGSLLNGRKYSDSSLPPSN
SGKIQSEANQCSLISNGPSLELGENGTSGKQNSEQMDMQDFKSDLKKPLVNGICDFDKGD
GSHLSKNIPNHKTSNHVGNGEISPMEPQGTLDATQQDTAKGDQLERISNGPILTLGGSPS
VSSIQEAPNVATQQFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIVAVP
HSGSRVSHSPALSSDVRSTNGTAECKTVKRPAEDNDRETVTGIPNKVGVRIVTISDPNNA
GCSATMVAVPAGADPSTVAKVAIESAVQQKQQHPPTYVQNVLPQNTPLTPSPAAQVQNQP
STFQPSPFSASNQQGDPVRKPGHNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQC
LWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPAVGGTSSTP
RTQKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGR
RLLKRHENNLSVLAISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggcagccgggggcacagcctcggccccgtcgccctcggtttctgagaagaat
cagtggggagaaattgttgaagagttcaactttcccagaagttgttctaacgctgccttt
gctttaaaacagtattacttgcgttacctagaaaagtacgagaaagttcatcattttggg
gaggatgatgatgaggtaccaccaggcaatccaaagccacagcttcctattggtgcaatt
ccatcttcctacaattaccagcaacacagtgtgtcagattatctgcgtcaaagttatggg
ctgtctatggacttcaattcgccaaatgattataataaattggtgctttcactgttatct
ggactcccaaatgaagtggactttgctattaatgtatgcactcttctgtcaaatgaaagc
aagcacgtcatgcaacttgaaaaagaccctaaaatcatcactttattacttgctaatgct
ggggtgtttgacgacactttaggatccttttctactgtatttggtgaagaatggaaggag
aagactgatagagattttgttaagttttggaaggacattgttgatgataatgaagtacgt
gacctcatttctgacagaaataagtctcatgaaggtacatcaggagaatggatttgggaa
tctttatttcatccacctcgaaagctgggcattaatgatattgaaggacaacgggtactt
cagattgcagtgattttgcgaaatctttcctttgaggagggcaatgttaagctcttggca
gctaatcgtacctgtcttcgtttcctattactttctgcacatagtcattttatttctcta
aggcaattaggccttgacacgttaggaaatattgcagctgagcttctattggaccctgtc
gatttcaaaactactcatctgatgtttcatactgttacaaaatgcctgatgtcaagggat
agatttttaaagatgaggggcatggaaattttgggaaatctttgcaaagcagaagataat
ggtgttttgatttgtgaatatgtcgatcaggactcatacagagagatcatttgtcatctc
actttacctgatgtgctgcttgtaatctcaacactcgaggtgctatatatgctcacagaa
atgggagatgtcgcttgcacaaaaattgcaaaagtagaaaagagcatagacatgttagtg
tgtctggtttctatggatattcagatgtttggccctgatgcactagctgcagtaaaactc
gtcgaacatccaagttccagtcatcaagttttgtctgaaattaggccacaagctgtagag
caagtccaaacccagacccatgtagcgtctgccccagcttccagagcagttgtagcacag
catgttgctccacctccaggaatagtggaaatagatagtgagaagtttgcttgtcagtgg
ctaaatgctcattttgaagtaaatccagattgttctgtctctcgagcagaaatgtattct
gagtacctctcaacgtgcagtaaattagctcgtggtggaatcctaacttcaactggattt
tataaatgtcttagaacggtctttccaaatcatacagtgaagagagtagaggattccagc
agcaacgggcaggcacatattcatgtagtaggagtaaaacggagggctataccacttccc
gttcagatgtactatcagcagcaaccagtttctactcctgttgttcgtgttgattctgtt
cctgatgtatctccaagtccttcacctgcaggaatccctcatggaccacaaactgtagga
aaccattttcagaggacttctgtcaccaaccaatcttcaaatttgactgcaacacaaatg
tcttttccagtacaaggtgttcatactgtggcacagactgtttcaagaatcccaccaaat
cctaccgttcatacccaccagcagcaaaatgctccagtgactgtcattcagaataaagct
ccaattccttgtgaagttgttaaggctacagtgatccagaattctctaccccagacagca
gttcctgttagtattgctgtgggaggaggagctcctcagagttctgtggttcagaatcat
agtacagggccacagcctgttacagttgtaaattcccagacattgcttcatcatccatct
gtaattccacaacagtctccattacacacagtggtaccaggacagataccttcaggcact
cctgttacagtaattcaacaagccgtcccgcagagtcatatatttggcagagtgcagaac
ataccagcatgtacttctacagtttcacagggtcaacagttaatcaccacatcaccccag
cctgtgcaaacttcatctcagccgacatcagctggtagccagccgcaggacactgttatc
atagcaccttcacagtatgtaacaacttctgcatccaatattgtctcagcaacgtccgta
cagaattttcaggtagctacaggacagatggttaccattgctggtgtcccaagtccacag
ccctcaagagtgggatttcagaacattgcaccaaaacctctcccttctcagcaggtttca
tcgacagtggtacaacagcccattcaacaaccacagcagccaacccaacagagtgtagtg
attgtaagccagccagctcaacaaggtcaaacttatgcaccagccattcaccaaattgtt
cttgctaatccagcagctcttccagctggtcagacggttcagctaactggacaaccaagc
ataactccatcttcctcaccatcacctgcaccggctactaataaccaagtcccagctgcc
atgtcatcttcttccacccctcagtcacagggaccacctcctactgtcagtcagatgctg
tctgtgaagaggcagcagcagcagcagcattcaccagcaccttcaccacaacaggtacaa
gtacaggttcagcagccacaagtacagatgcaagttcagccacagcagacaaacgcaggc
gttggtcagcctgcatctggtgagtcaagtctgataaaacagttgctgcttccaaagcgt
ggtccttcaacaccgggtggtaagctaattctcccagctccacagattcctccccctaat
aatgctagagctcctagccctcaggtggtataccaggtggccaataaccaagcagcaggt
tttggagtgcaggggcaaacttcggctcagcagctattggttgggcagcaaaatgttcag
ttggtccaaagtgcaatgcctcccgcagggggagtgcaaactgtgcccatctcgaactta
caaatattgccaggcccactgatctcaaatagcccagcaaccattttccaagggacttct
ggcaaccaggtaaccataacagttgtgccaaatacaagttttgcaactgcaactgtgagt
cagggaaatgcaactcagctcattgctccagcaggaattaccatgagtgggacgcaggca
ggagttggacttcaggtgcaaacgcttccagccactccgacatctccagctggacaatca
tcttgtactactgctactcccccgttcaaaggtgataagataatttgccaaaaggaggag
gaagcaaaagaagcaacaggtttacatgttcatgaacgtaagattgaagtcatggagaac
ccgtcctgccgacgaggagccacgaacaccagcaatggggatacaaaggaaaatgaaatg
caggtgggaagtcttttaaatgggagaaagtacagtgactcaagtctacctccttcaaac
tcagggaaaattcaaagtgaggctaatcagtgctcactaatcagtaatgggccatcatta
gaattaggtgagaatggaacatctggaaaacagaactcagaacaaatggacatgcaggat
ttcaaaagtgatttgaaaaaacctctggttaatggaatctgtgattttgataaaggagat
ggttctcatttaagcaaaaacattccaaatcacaaaacttccaatcacgtaggaaacggt
gagatctctccaatggaaccacaagggactttagatgccactcagcaagatactgccaaa
ggtgatcaactagaaagaatttctaatggacctatattaactttgggtggttcaccatct
gtgagcagtatacaggaggctccaaatgtggcgacacagcagtttagtggtactgatttg
cctaatggacctctagcttcaagtttgaattcagatgtgcctcagcaacgcccaagtgta
gttgtctcaccacattctacaacctctgttatacaggggcatcaaatcgtagcagttcct
cactcaggatcaagagtatcccattctcctgccctgtcatctgacgttcggtctacgaat
ggcacagcagaatgcaaaactgtaaagaggccagcagaggataatgatagggagacagtc
acaggaattccaaataaagtaggagtcagaattgttacaatcagtgaccccaacaatgct
ggctgcagtgcaacgatggttgccgtgccagcaggagcagatccaagcactgtagcgaaa
gtagcaatagaaagtgctgtgcagcagaagcagcagcatccgccaacatacgtacagaat
gtgctcccgcagaacactcctctgacgccttcaccagctgcacaggtgcagaaccagccc
agcacttttcagccttctccgttcagtgcgtctaatcaacaaggggatcccgtgaggaaa
cctggacacaacttcatgtgtctgtggcagtcttgtaaaaaatggtttcagactccctcg
caggttttctaccacgcggcaactgaacatggaggaaaagatgtatatccagggcaatgt
ctttgggaaggttgtgagccttttcagcgacagaggttttcttttattacccacttacag
gataagcactgttcaaaagatgccctgcttgcaggattaaaacaagatgaaccaggacaa
gcaggaagtcaaaagtcttctaccaagcagcctgctgtagggggcaccagctcaacgcct
agaacacaaaaggccattgtgaatcatcccagtgctgcccttatggcccttaggagagga
tcaagaaaccttgtctttcgagattttacagatgaaaaagagggaccaataactaaacac
atccgactaacagctgccttaatattaaaaaatattggtaaatattcagaatgtggtcgc
agattgttaaagagacatgaaaacaacttatcagtgctagccattagtaacatggaagct
tcctctacccttgccaaatgcctttatgaactcaattttaccgttcagagtaaagaacaa
gaaaaagactccgaaatgctgcagtga
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integrated database retrieval system
