Crocuta crocuta (spotted hyena): 144223234
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Entry
144223234 CDS
T11532
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03013
Nucleocytoplasmic transport
ccru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
144223234 (UPF3A)
03015 mRNA surveillance pathway
144223234 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccru03019
]
144223234 (UPF3A)
Messenger RNA biogenesis [BR:
ccru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
144223234 (UPF3A)
mRNA cycle factors
P-body specific factors
144223234 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
144223234
NCBI-ProteinID:
XP_077610079
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MGSEKEGAGGPGAAVAARCPSGREKLSAVEVQFRRESPRREPEAPPASSLGCGGGTCKPR
EERKTVLSKVVIRRLPPSLTKEQLEEQLHPLPAHDYFEFFTADFSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKF
LENYCVEEEKANANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKREERR
RRELEKKRLREEEKRKKREEEKCKRKEADKQKRTAEREVRIKLLKKPEKGEEPTTEKPKE
RREEMDIRDGEQESCPGCAVRKPMLLGSSLGESREKSQNDSDKEQREMDRRFREKDPETQ
RCHVDDSRKHRAHCEFDRLSRRNEEEPKWRKGGPPDRGKKGSQDSGIPVETAERPGKEQR
SEGGPAPKTERPGNKDRPTLQLYQPGARIRAREGGGGTSVECPDGSRGEAEDSAQGGSQK
NEEAG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggctcagagaaggagggagccggaggcccaggggctgctgttgctgcgcgatgcccg
agcgggagggaaaagctgtcggccgtggaagtccagtttcgccgggagtcgccgcggcga
gaacccgaggcgcccccagcgtcgtccttgggctgcgggggcggcacttgcaaacctcgc
gaggagaggaaaacggtcctgagcaaggtggtcatccgtcggcttcctcccagcctcacc
aaggagcagctggaagagcagctacacccactgcccgcacatgattactttgagttcttt
actgccgatttcagtctttatcctcatctctactcaagagcatacattaattttagaaat
cctgatgacatccttctttttagagatcgttttgatggatatatcttcattgacagtaaa
ggcctagaatatcctgcagtggtagagtttgccccattccagaagatagccaaaaagaag
ctcaagaaaaaagatgccaaaaccggaagcattgaagacgatccagaatataagaagttt
ttggaaaattactgtgtggaggaagagaaagctaatgccaatcctgaaactctcctggga
gacatagaggcaaagacaagagaacttattgctagaagaaccacacctcttttggaatat
attagaaatagaaaattagagaagcagaggattcgagaagagaagcgagaagagcgaagg
aggagggagctggagaagaagcgattacgggaagaagaaaaaagaaaaaagagagaagag
gagaagtgtaagagaaaagaagcagacaaacagaagagaacagctgagagagaagtaagg
attaagcttcttaagaagccagaaaagggagaggaaccaaccactgagaagccaaaagaa
agaagagaggaaatggatattcgagatggagaacaggagtcctgtcctggctgtgctgtc
cggaagcccatgctcttggggagctcgctgggggagtccagggaaaagtcacagaatgac
agtgataaagagcaaagggagatggacagaagattcagagaaaaagatcctgaaacacaa
agatgccatgtggatgacagcagaaagcatagagctcactgtgagtttgacaggctttca
aggagaaatgaagaagagccaaaatggaggaaaggaggccccccagacagagggaagaag
gggagtcaggacagtggcatccctgtggagacagcagagcggcctgggaaagagcagagg
agtgaaggtggcccagcacccaaaacggagcgcccaggaaacaaggatcgaccgaccttg
cagctatatcagccaggagctcgcattcgagcacgagaaggtggtgggggaacctctgtg
gagtgccccgacgggagcaggggtgaggctgaagattcagcacagggtggttcccagaag
aacgaagaggcagggtga
DBGET
integrated database retrieval system
