KEGG   Crocuta crocuta (spotted hyena): 144224921
Entry
144224921         CDS       T11532                                 
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
ccru  Crocuta crocuta (spotted hyena)
Pathway
ccru03015  mRNA surveillance pathway
ccru05164  Influenza A
Brite
KEGG Orthology (KO) [BR:ccru00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    144224921 (CPSF4L)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    144224921 (CPSF4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccru03021]
    144224921 (CPSF4L)
   03019 Messenger RNA biogenesis [BR:ccru03019]
    144224921 (CPSF4L)
Transcription machinery [BR:ccru03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     144224921 (CPSF4L)
Messenger RNA biogenesis [BR:ccru03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     144224921 (CPSF4L)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_3 zf-CCCH_2 zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_12 zf-C3H1 zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 144224921
NCBI-ProteinID: XP_077612144
LinkDB
Position
Unknown
AA seq 242 aa
MQEIIAGLDQFTFTFEKDVERQKGTGLLPFQGMDKSGSAVCNFFAKGVCEKGKLCPLRHS
RGEKMVVCKHWLRGLCKRGDQCNFLHQYDVTRMPECYFYSKFGDCNNKECPFLHLKPAFK
TWDCPWYDQGFCKDGPLCKHRHVRKIMCANYFVGFCPEGPKCRFAHCPPSHAICSKYPPV
PGEAAAQTPSHLRNLCFRGKAGQGTEGALCCVQVGSRLEGGKPLQSLFAIHKPMARFWPL
KP
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcaagagatcattgctgggctggaccagttcaccttcaccttcgagaaggatgtagag
aggcaaaaaggcactggactcctgcctttccagggcatggacaagtccggctcagctgtg
tgcaactttttcgccaaaggggtctgtgagaaagggaaactctgccctctccggcacagc
cgaggggagaagatggtggtgtgtaagcactggctgcggggactgtgtaagaggggcgac
cagtgcaacttcttgcaccagtacgatgtcacccggatgcccgagtgctacttctactcc
aagttcggtgattgcaacaacaaggagtgtcccttcctccacctgaagccagctttcaag
acctgggactgtccttggtatgatcaaggcttctgcaaggatggtcccctgtgcaaacac
cgccatgtccgtaagataatgtgtgctaactacttcgtgggcttctgccctgagggaccc
aagtgccgatttgcccactgccctccctctcacgcgatctgctccaagtacccgccagtc
cccggagaggccgcggcccagaccccctcccacctccgtaacctctgcttcagagggaag
gcgggccagggcacggagggcgccctctgctgcgtccaagtgggatctcggctggaaggc
gggaagcctcttcagtcgctgtttgcaattcacaagcccatggcacgcttctggccatta
aaaccgtaa

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