Crocuta crocuta (spotted hyena): 144226376
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Entry
144226376 CDS
T11532
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru04136
Autophagy - other
ccru04140
Autophagy - animal
ccru04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
144226376 (ATG16L1)
04136 Autophagy - other
144226376 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
144226376 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccru04131
]
144226376 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
ccru03029
]
144226376 (ATG16L1)
Membrane trafficking [BR:
ccru04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
144226376 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
144226376 (ATG16L1)
Mitochondrial biogenesis [BR:
ccru03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
144226376 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
ATG16
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Tricorn_2nd
Beta-prop_ACSF4
Beta-prop_NWD2_C
ZapB
Beta-prop_VPS8
CCDC93_CC
KASH_CCD
CCDC39
CC_Bre1
Fez1
Vma22_CCDC115
Leu_zip
HEF_HK
PUMA_CC
Spore_coat_CotO
WHD_CYT4
Phage_GPO
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
144226376
NCBI-ProteinID:
XP_077613890
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQKDREMQMNEAKIAECLQTISDLETE
CQELRSKLQDLERANQTLKDEYDALQITFTALEEKLRKTTEENQELVTRWMAEKAQEANR
LNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDIEVIVDETSDHAEETSPVRAISRGA
TKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGSSKEVRVPTTAICVFDAHDGE
VNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAA
SNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIK
TVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELL
SCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWNVL
SGKVEKVLSKHHGSSINAVAWSPSGSHVVSVDKGSKAVLWSEY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgaggattaaacaccaagaagaactgactgaattacacaagaaacgtggg
gagctagctcagttggtgattgacctgaataaccaaatgcaacagaaggacagggagatg
cagatgaatgaagcaaaaattgcagaatgcttgcagaccatctctgacctggagacggag
tgccaagaactgcgcagcaagcttcaggacctcgaaagagccaaccagaccctgaaggat
gagtacgatgccctgcagatcacgtttactgccttggaggagaaactgaggaaaactact
gaagagaaccaggagttggtcaccagatggatggccgagaaagcccaggaagccaatcgc
ctcaatgcagagaatgagaaggattcaaggcggcggcaagcccggctgcagaaggagctc
gcagaggccgccaaggaaccgctacccgttgaacaggatgatgacattgaagtcattgtg
gatgaaacctctgatcatgccgaggagacctctcctgtgcgagccatcagcagaggggcc
actaagcgactctcgcagcctgctggaggccttctggattctatcactaatatctttggg
aggcgctctgtctcttcctttccagttccccaggataacgtggatactcatcctggttct
agtaaagaagtgagagtgccaacgaccgccatatgtgtctttgatgctcatgacggggag
gtcaacgccgtgcagttcagcccgggctcccggctactggccaccggaggcatggatcgg
agagttaagctttgggaagtgttcggagataaatgtgagttcaagggctccctgtctggc
agtaatgcaggaattacaagcattgaatttgacagtgctggttcttacctcttagcagct
tcaaatgattttgcaagtcgaatctggaccgtggatgattatcggttacggcacacgctc
acaggacacagcggcaaagtgctgtctgccaagttcctgctggacaatgcgcgcattgtt
tccggaagtcacgaccggaccctcaagctctgggatctccgcagcaaagtctgcataaag
accgtgtttgcaggctccagctgcaatgacatcgtctgcacagagcagtgcgtgatgagc
gggcacttcgacaagaaaattcgtttctgggacatccgatcagagagcattgtccgagag
atggagctgctgggcaagatcactgccctggacttgaacccggaaaggaccgaactcctc
agctgctctcgggatgacctgctaaaaattatcgatctgcgaataaacgctgtcagacag
acatttagcgcccctggattcaagtgcggctccgattggaccagagttgtgttcagccct
gatggcggttacgtggcagcaggctcagctgagggctccctctacatctggaacgtgctc
tcggggaaagtggagaaggtcctttcaaagcatcatggctcgtccatcaacgccgtggcg
tggtccccctccggctcccatgttgtcagtgtggacaaaggaagcaaagccgtgctgtgg
tcagaatattga
DBGET
integrated database retrieval system
