Crocuta crocuta (spotted hyena): 144228394
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Entry
144228394 CDS
T11532
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
ccru Crocuta crocuta (spotted hyena)
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccru03009
]
144228394 (LTN1)
04121 Ubiquitin system [BR:
ccru04121
]
144228394 (LTN1)
Enzymes [BR:
ccru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
144228394 (LTN1)
Ribosome biogenesis [BR:
ccru03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
144228394 (LTN1)
Ubiquitin system [BR:
ccru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
144228394 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
zf-RING-like
zf-RING_16
HipN
Motif
Other DBs
NCBI-GeneID:
144228394
NCBI-ProteinID:
XP_077616339
LinkDB
All DBs
Position
Unknown
AA seq
1766 aa
AA seq
DB search
MGGKNKQRTKGNLRPSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSL
VDSDFRMVLRKLSKKDVTTKLKAMQEFGTMCTERDTEVVKGVLPYWPRIFCKISLDHDRR
VREATQQAFEKLILKVKKHLAPYLKSLMGYWLMAQCDTYTPAAFAAKDAFEAAFPPSKQP
EAIAFCKDEITSVLQDHLLKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKKLLCLLP
DNELDSLEEKFKSLLSQNKFWKYGKHSIPQIRSAYFELVSALCQRIPQLMKDEASKVSPS
VLLSIDDSDPIVCPALWEAVLYTLTTIEDCWLHVNAKKSVFPKLSAVVREGGRGLATVIY
PYLLPFISKLPQSITDPKLDFFKNFLTSVVAGLSTERIKTSFSECSAVISAFFECLRFIM
QQNLGEEEIEEMLVNDQLIPFIDAVLKDPRLQDGQLFNHLAETLRSWEAKADVEKDDKIA
HSLDKVLLNFWERLSEICVEKINEPEADVKSVSGVSNLLQVLQKPKSSLKSNKKKVGKVR
FADELPENNKENEKCVSSEGENSEGSELMAEPSLSHNCSDLVSPLRKKPLEDLVCKLAAM
SINYVNEQKSEQHLRFLSTLLSSFSSTQVFKMLLGDEKQSTVKAKPLEIARLIQKNPAVQ
FLYQKLIGWLNEDQRKDAGFLVDILYSALCCCENNMERKYVLDDLIEGNLNWNSILQVIE
KARSSSDKHALVTPWLKGDVLGEKLVTLADHLCNKDLESTVSSDSYFSEKWALLSLVLSQ
HVENDYLIGEVYVERIIVKLHETLSKVKELSEAENNDSSVSFICDVAYNYFSSAKGCLLM
PSSEDLLLTLFQLCAQNKEKTHLPDFLVCKLKNTWLSGVNLLTHQTGSTCKQSTFLCLSA
LWLKNQVQSSSLDIKSLQVLLCAVDDLLNMLLESEDPNLLGVYIGSVMPSNSEWEKMRQS
LPMQWLHRPLLEGRLSLNYECFKTDFKEQDTKSLPSHLCTSALLSKMILVALKKEIVLEN
NELEKIIAELLYSLQWYEELDNPPIFLTGFCEMLQKMNITYDNLCGLGNTSGLLHLLFNR
SMENGTLWSLIIAKLILSRSVSSDEVKRHYRRKEGFFPLTEGNMHTIQSLCPFLSKEDKK
EFIAQCIPPLLAWTKEDLCSTNGGFGHLAIFNSCLQTRSIDDGELLHGILKILISWKKDH
EDVFLFSCNLSEVSPEILGVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTRE
NHALYSVPLVQLFACVSCDLACELSAFFDSTTLDTVGHLPVNLISEWKEFFSQGIHSLLL
PLLVTVTGESKDTSETSFQNAVLKPMCETLTYIPKDQLLNQKLPSRLVAGQKTNLPEYLQ
TLLNTLAPLLLYRARPVQIAVYQMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMS
LLSTQEDLLENVLGCIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYS
MYLRKTKSLNKLLYHLFRLMPENPTYAETAVELSSKDPKTFFTEELQLSIREMATLPYHI
PHLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSNVLSFQEISSVQTSTQL
FNGMTVKARATTREVMATYTIEDIVIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWM
LQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKK
FHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggaagaacaagcagcggaccaaggggaacctgaggccttcaaacagtggccga
gccgcagaactccttgccaaagaacagggaacggtgcctggatttattggttttggaaca
tcacagagtgacctaggttatgttcctgctattcaaggagctgaagaaatagacagtctt
gtagattctgatttccgaatggtgctgcggaaactttctaagaaagatgtcacaacaaaa
ttaaaagctatgcaggaatttggaaccatgtgtacagagagagacacagaagttgtaaaa
ggagttcttccatactggccaagaattttctgcaaaatttcacttgatcatgatcgccgg
gttcgagaagccacacagcaggcttttgaaaagcttatccttaaagtaaagaaacacttg
gctccttatttaaaaagtttaatgggctattggctgatggctcagtgtgatacttataca
ccagctgcctttgcagcaaaagatgcctttgaagcagctttccctccaagcaagcaacct
gaagccatcgcattttgtaaggatgaaattacaagtgtgctgcaggatcatcttctaaaa
gaaacacctgatacactcagtgatccacaaacggttccagaggaagaaagagaagctaaa
ttctatcgggttgtaacttgttccttattggcattaaaaaaattgctttgcctcttacct
gataatgagcttgattctctggaggagaaatttaagtctcttttatcacagaataaattt
tggaagtatggaaaacacagtatacctcagatccgctcagcttattttgagttagtttct
gctttgtgccagcgtattccacagctgatgaaagatgaagcgtccaaagtgagcccatct
gttctacttagcattgatgacagtgaccccattgtatgcccggctctctgggaagctgta
ctttatacacttacaactattgaggactgttggcttcatgtaaatgcaaaaaaaagtgtg
tttccaaagctgtcagctgtggttcgtgaaggcggtcggggtctggctactgtcatatat
ccttatcttttgccatttatcagcaaactgcctcagtccattacagatccaaagttggat
ttcttcaaaaatttcctcacctcagtagttgcagggctatcaacagagagaattaaaacc
agcttttcagagtgctcagcagtaatatcagctttttttgaatgcttacgttttataatg
caacaaaacttaggtgaggaagaaattgaagagatgctcgtcaatgaccagttgattcct
tttattgatgcagttctcaaagacccaagattgcaagatgggcagctctttaaccattta
gcagaaaccttacgttcctgggaagccaaagcagatgtggaaaaagatgataaaatagct
cacagtttggacaaagtactgctgaatttttgggaaagactgtcagagatctgtgtggaa
aaaatcaatgagccagaagctgatgtgaaatccgtgtcaggtgtatctaacctgctacag
gtccttcagaagccgaagagctcactgaagtcaaataaaaaaaaagttggtaaggttaga
tttgctgacgagctacctgaaaataataaagagaacgaaaaatgtgtctcctctgaaggc
gaaaacagtgaaggctctgaattaatggctgaaccttctctctctcataattgttcagac
cttgtatcaccactaaggaaaaaacctttggaagacttggtctgtaaactagcagcgatg
agtattaattatgtcaatgagcaaaagtcggagcaacatctaaggtttctttccactcta
ctcagctctttctcttcaacccaagtatttaaaatgctactaggtgatgaaaaacagagt
actgtcaaagctaaacctcttgaaatagccaggctcatacaaaaaaatcctgcggtgcag
tttttataccagaaactgataggttggctaaatgaagatcaaaggaaggatgctggtttc
ttggtggacattttgtacagtgccctctgttgctgtgaaaataatatggaaagaaaatac
gtcttggatgacctcatcgaggggaatctgaactggaattctattcttcaggtcattgaa
aaggcacgttctagttcagataaacatgctttagtaactccttggctaaaaggagatgtc
cttggagagaaattggtaaccttggcagatcatctttgtaataaggatttggaatccaca
gtatcttctgattcttacttctcggaaaaatgggctcttctaagcttggtattatctcaa
catgttgaaaatgattacttgattggagaagtgtatgttgaaagaattattgttaaactt
catgaaactttatcgaaagtaaaggaattgtcagaagctgaaaataatgattcatcagtg
tcttttatctgtgatgtggcctataactatttcagctcagcaaaaggatgcttgctaatg
ccatcatctgaagacttattattaactctctttcagttatgtgctcagaacaaagaaaaa
acacatttgccagactttcttgtctgtaaactgaaaaatacttggctctctggtgtgaat
ttattgacccaccaaactggcagtacatgtaaacagagtaccttcctgtgtttgtctgct
ctgtggctcaagaaccaagttcagtcttcatctttggatatcaaaagtcttcaagtcctc
ttgtgtgctgttgatgatttgctaaatatgcttctagaaagtgaagatcctaatcttctg
ggagtttatattggaagtgtaatgccaagcaacagtgaatgggaaaagatgagacagtct
cttccaatgcagtggttgcatagacctcttttagaaggaagattgagtttgaattatgaa
tgtttcaaaacagattttaaagaacaagatacaaagagtcttcccagccacttgtgtact
tcagcattattgagcaaaatgatattagttgcactgaaaaaggaaatagtcctagaaaat
aatgagcttgagaaaataattgcagaactgctctattcactgcagtggtatgaagaatta
gacaatccacctatttttctaaccggattttgtgaaatgcttcaaaagatgaatattaca
tatgataacttatgtgggcttggtaatacttctggccttttacacctgttatttaacagg
tccatggaaaatggcaccctttggtctcttattattgctaagttgatcctttcccgaagt
gtttcatctgatgaagtaaaacggcattataggagaaaagaagggtttttcccactgaca
gaaggcaatatgcataccattcaaagtctctgtccgtttttgtcgaaagaagacaagaaa
gaattcattgctcagtgtatacctccccttttggcctggactaaggaagatctttgcagt
actaatggaggttttggacaccttgccattttcaactcttgtctgcaaaccagaagcata
gatgatggggagctattacatggtatattaaaaattctaatatcctggaagaaagatcat
gaagatgtttttcttttcagttgtaatctatcagaagtaagtccagagatattaggtgta
aatatagaaataatccggttcctttccctgttcctgaaatactgttcatctcctttggca
gagagtgaatgggacttcatcatgtgctccatgttggcttggttggagacgacaagggag
aatcatgcattgtattctgtgcccctggtacaactgtttgcctgtgtcagctgtgatttg
gcctgtgagctcagtgctttttttgattccacaactctggataccgttggccatctccct
gtgaatctaatcagtgaatggaaagaatttttttcccaaggcatccacagtttgctttta
cctcttttggtgactgttacaggagaaagcaaagacacatctgaaacatccttccagaat
gcagtgctgaagcccatgtgtgaaacattaacctatatcccaaaggaccagctgttgaat
caaaaactcccttcaagattggttgctggccagaaaacaaacttaccagaatatcttcag
actttgctaaatactttggccccattactcctctacagagctcggcctgtgcaaattgct
gtttaccagatgctgtacaagttgatgcctgaattaccacagtatgatcaggataatctg
aagtcgtatggagatgaagaagaagaaccagccttgtcaccaccagcagccctgatgtct
cttcttagcactcaagaggacttactagaaaatgttttggggtgtattcctgttggacag
atagtgactattaagccactgagtgaagacttctgctatgttctgggatatctcctcact
tggaaattaatacttactttcttcaaagctgcttcatctcagcttcgggcactgtattca
atgtatcttcggaaaacaaaaagtttgaataaattgctctatcacctgttcaggctgatg
ccagaaaacccgacctatgcagagacagctgttgagctctccagtaaggaccctaaaaca
ttctttacggaagagctccagttgagtattagagaaatggcaactctcccataccatatc
ccacatttggcttgttcagtctatcatatgacattaaaagacttacctgccatggtgagg
ctgtggtggaatagtagcgagaagcgtgttttcaatattgtagatagattcacaagcaag
tatgtcagcaatgttctttcttttcaagaaatttcttctgtacaaacaagtacacaactg
tttaatggcatgacggttaaagctcgggctaccactcgagaagtgatggctacttacact
attgaggacatagttattgagcttataatccagctgccttcaaattatccgctgggctca
attaccgtggagagtgggaagagagtgggagtggctgttcagcagtggcggaactggatg
ctgcagttaagcacttacctcacccatcaaaatggaagtattatggaaggcctcgcatta
tggaaaaataatgtagacaaacgttttgagggtgttgaagactgcatgatctgtttctca
gtcattcatggtttcaactattctcttcccaaaaaagcctgtagaacatgcaagaaaaag
ttccattcagcctgcttgtacaaatggtttacgtctagcaacaaatccacttgtccactc
tgtcgtgagacctttttctga
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integrated database retrieval system
