Crocuta crocuta (spotted hyena): 144228984
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Entry
144228984 CDS
T11532
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
144228984 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccru01007
]
144228984 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccru03016
]
144228984 (VARS1)
Enzymes [BR:
ccru01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
144228984 (VARS1)
Amino acid related enzymes [BR:
ccru01007
]
Aminoacyl-tRNA synthetase
Class I (U)
144228984 (VARS1)
Transfer RNA biogenesis [BR:
ccru03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
144228984 (VARS1)
Prokaryotic type
144228984 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1_2
tRNA-synt_1g
Val_tRNA-synt_C
GST_C_2
tRNA-synt_1e
Arc1p_N_like
Jag_N
Motif
Other DBs
NCBI-GeneID:
144228984
NCBI-ProteinID:
XP_077617043
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPPPTSRTPFPPPRLPAL
EQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGAALPALG
LRSSAQDPQAALEALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPSA
RRIWGNVTRWFITCVQQPEFRAVLGEVVLYSGTRSLSQQPGPEVPAPPKTATQLKKEAKK
REKLEKFQQKQKSQQQQPPPGEQKKPKPEKRGKRDPGVVTYDLPTPSGEKKDVSGAMPDS
YSPQYVEAAWYPWWEQQGFFKPEYGRASVSAPNPRGIFMMCIPPPNVTGSLHLGHALTNA
IQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWRERGLSRHQLGREAFLQEVWKW
KEEKGDRIYHQLKKLGSSLDWNRACFTMDPKLSAAVTEAFVRLHEEGVIYRSTRLVNWSC
TLNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIE
TMLGDVAVAVHPKDPRYQHLKGRSVIHPFSSQSLPIVFDDFVDMEFGTGAVKITPAHDQN
DYDVGQRHGLEAINIMDSRGALINVPPPFLGLPRFEARKAVLAALKERGLFRGIEDNPMV
VPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDW
CISRQLWWGHRIPAYFITVNDPAVPPGEDPDGRYWVSGRSEAEAREKAAKEFGVSPDKIS
LQQDEDVLDTWFSSGLFPFSILGWPNQSEDLNVFYPGTLLETGHDILFFWVARMVMLGLK
LTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEV
EKAKEGQRADFPTGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
SLRGLGKGFVPSPTSEPGGRESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWL
YELCDVYLECLKPVLNGVDQVVAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRT
PQAPPSLCITPYPEPSECSWKDPEAEAAMELALSITRAVRSLRADYNLTRIRPDCFLEVA
DEATGALASAVSGYVQALASAGVVAVLALGAPVPQGCAVALASDRCSVHLQLQGLVDPAR
ELGKLQAKRGEAQRQAQRLRERRAASSYPTKVPLEVQEADKVKLQQTETELRKVDEAIAL
FEKML
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctgtacgtctcccctcatcccgatgccttccccagcctccgtgcccttata
gctgcgcgttatggggaggctggggagggacccggttggggaggagcccaccctcgcatc
tgtctccagccacccccgaccagcaggactccctttcccccaccccgcctgcccgccctg
gagcaggggcccggcgggctctgggtgtggggggccaccgctgtggcccagctgctgtgg
ccagcaggcctggggggccctggcggtagccgggccgccgtcctggtccaacagtgggtc
agttatgccgacacggagctcataccagctgcctgtggagcagcgcttccggccttggga
ctccgaagctccgcccaggacccccaggctgccctggaggccctggggagggctctgagc
cccttggaagagtggcttcggctgcacacctacctggctggggaggcccccactctggct
gacctcgcagctgtcacagccttgctgctacctttccgttatgtcctggacccctctgcg
cgccggatctggggtaatgtgactcgctggtttatcacctgtgtccagcagccagaattc
cgagcagtgctgggagaggtggttctgtactcagggaccagatcgctctcccaacagcca
ggccctgaggtccctgcacccccaaagacggctacgcaactcaagaaagaggcaaagaaa
cgggagaagctagagaaattccaacagaagcagaagagccaacagcagcaaccaccccca
ggggagcagaagaaaccaaaaccagagaagagggggaaacgggatcctggggtcgttacc
tacgacctcccaaccccatctggggaaaagaaagatgtcagtggcgccatgcctgactcc
tacagccctcagtacgtggaagctgcctggtatccttggtgggagcagcagggtttcttc
aagcccgaatacgggcgtgccagcgtatcagcaccaaatccccggggaatcttcatgatg
tgcatcccaccccccaatgtgacaggctccctgcacctgggccacgcactcaccaacgcc
atccaggactccctgacccgatggcaccgcatgcgaggggagactaccctatggaaccct
ggctgtgaccacgcaggcattgccacccaggtggttgtggaaaagaagctctggcgtgag
cgagggctgagccggcaccagctgggccgagaggccttcttacaggaggtctggaaatgg
aaagaggagaagggtgatcggatttaccaccagctgaagaagcttggcagctctttagac
tggaatcgagcctgtttcaccatggaccctaaactctcagcagctgtgacagaggccttt
gtccggctccacgaggaaggagtcatctaccgcagtactcgccttgtcaactggtcctgc
accctcaattctgccatctctgacatcgaggtggataagaaggagctgacaggtcgcact
ctgctctccgtgcctggctacaaggagaaggtggagtttggggtccttgtctcctttgcc
tacaaggtccaaggctcagacagtgacgaggaggtggtagtggcgaccactcggattgaa
acgatgctgggagacgtggctgtagctgtgcaccccaaagacccgagataccagcacctg
aaggggaggagcgtgattcacccgttctcatctcagagcctccccatcgtctttgacgat
tttgtggacatggagtttggcacaggtgcggtgaagatcacccccgcacatgaccagaac
gactatgacgttgggcagcggcacgggctagaggccatcaacatcatggactcccgtggg
gccctcatcaacgtgcccccgcctttcctgggcctaccaaggttcgaggccaggaaggct
gtgctggcggcactgaaggagcggggactgttccgaggcattgaggacaaccctatggtg
gtgcccctttgcaaccggtctaaggatgtggtggagcctctcctgcggccacagtggtac
gtgcgctgtggggagatggcccaggctgccagtgctgctgtgacacgcggtgacctccgc
atcctgcctgaggcccatcaacggacatggcacgcctggatggacaacatccgggactgg
tgcatctcccggcagctgtggtggggccatcgcatcccagcctacttcatcacagtcaat
gacccagccgtgcccccaggggaggaccctgatgggcggtactgggtgagtgggcgcagc
gaggccgaggcccgggagaaggcagccaaggaatttggagtgtcccctgacaagatcagt
cttcagcaagatgaggatgtattagacacctggttctcctctggcctcttccccttctcc
atcctgggctggcccaatcagtcagaagatctgaatgtattttacccggggacgctgctg
gagacgggccatgacatcctcttcttctgggtggccaggatggtcatgcttggcctgaag
ctcactggcaagctgcccttcagagaggtctacctccatgccattgtgcgagatgcccac
ggccgaaagatgagcaagtctctaggcaacgtcatcgaccccctggatgtcatccacgga
gtctccctgcagggcctccatgaccagttactgaacagcaacctggatcccagtgaggtg
gagaaggctaaagaagggcagagggcagacttcccgacggggattcccgagtgcggcacc
gatgccctccggtttggactgtgtgcctacacatcccagggtcgtgacatcaacctggat
gtgaaccggatattgggataccgccacttctgcaacaagctctggaacgccaccaagttt
tccctgcgtggccttgggaagggttttgtgccatcacccacctctgagcctggaggccgt
gagagcctggtggaccgctggatccgcagccggctgactgaggctgtgaggcttagcaac
caaggtttccaggcctatgatttcccggctgtcaccactgcccagtacagcttctggctc
tatgagctctgtgatgtctacctggagtgcctgaagcctgtgctgaatggggtggaccag
gtggtggccgagtgtgctcgccagaccctctacacctgcctggacgttggcctgcgactg
ctctcacccttcatgcccttcgtgaccgaggagctgttccagaggctgccccggcggaca
ccacaagctccgcctagcctctgtattaccccctatccggaaccctcagagtgctcctgg
aaggaccctgaagcagaagctgccatggaactggccctaagcatcacacgagctgtgcgc
tccctgcgtgccgactacaacctcacccggatccggcctgactgtttcctggaagtggct
gatgaggccacgggcgctctggcgtcggcagtgtcgggctacgtgcaggcactggccagt
gcgggtgtggtggctgtcctggccctgggggctcccgtgccacagggctgtgctgtggcc
ctggcctctgaccgctgctccgtccacctgcagctgcagggactggtggacccggcccgg
gagctgggcaagctgcaggccaagcgtggtgaggcacagcggcaggcgcagcgtctgcgg
gagcgccgcgctgcctcgagctaccctacgaaggtgccccttgaagtccaggaggcggac
aaagtcaagctccaacagacagaaacagagctcaggaaggtggacgaggccatcgcgcta
tttgagaagatgctgtga
DBGET
integrated database retrieval system
