Crocuta crocuta (spotted hyena): 144230928
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Entry
144230928 CDS
T11532
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ccru Crocuta crocuta (spotted hyena)
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccru03000
]
144230928 (RC3H1)
04121 Ubiquitin system [BR:
ccru04121
]
144230928 (RC3H1)
Transcription factors [BR:
ccru03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
144230928 (RC3H1)
Ubiquitin system [BR:
ccru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
144230928 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
NS3_helicase_C
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
144230928
NCBI-ProteinID:
XP_077619460
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ASIDPSPDAPPPTWDQLEKGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAVLPDE
GAVDLPSRKTPALPNGIVSAGNTVTQLIPRGTDPTYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPVPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGAA
PPFEPAPYQQGMYYTPPPQCMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQVEGYYP
MAPHPTQIRPSYIREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEV
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPVQTMA
PQGAPTKPINISDYSPYGTHSGWGGSPYSPHQNIPSQGHFSERDRMSMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREVSTLAGQSQPPPPPPKWPGMIS
SEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLTL
TFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctctcctgcccaatttgcactcagact
tttgatgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactgcaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccctgtgaactcggcattgctgcagctagtgggtgctcaggtccctgag
cagcagcccattactctgtgtagtggggttgaagatacaaagcattatgaggaagccaag
aaatgtgtagaagagttagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaatagcactactcagagtgttctcagtcgcccaatgcagaggaagctggtgactctg
gtccactgccaacttgtggaagaggaaggcaggatccgtgctatgagagcagctcgatct
ttaggggaacgaacagttacagagctcattcttcaacaccagaaccctcagcaactgtcc
tccaatctttgggcagcagtcagagctaggggctgccagttccttggaccagcaatgcag
gaggaagctctaaagctagttctcttggccttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgtccagctcctttatagggcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttagaacatatgaagctctgcgg
cgagaacacgactcccagatagtgcagattgccatggaagccggcttgcggattgcacca
gaccagtggtcctcattgctttatggagaccaatctcacaagtctcatatgcagtcaatc
attgacaagttgcagaccccagcctcttttgcacagagtgttcaggaactaacaattgct
ctccagcgaactggagacccagcaaacttgaaccgactgagaccccatttggagctcttg
gcaagcattgaccctagtccagatgctcctcctcccacttgggatcagctagaaaaaggg
ctggtggctgtgcggacggtggtccatggcctggtagactatatccagaaccacagcaaa
aagggagcagaccaacagcagcctccacagcacagcaaatataaaacatacatgtgtcgc
gacatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcacag
gaggaactggagaagtttcgtaaaatgaacaaacgcctggttcccagaagacctctgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcagcagctgtccttccagatgaa
ggtgcagtggatctgcctagcagaaaaacccctgctctgccaaacggaattgtatcagca
gggaacacagtaacacagctgattccacgagggacagaccccacctacgattctagtctg
aagccaggaaagatagatcatctgagcagtagtgcccctggatccccgcctgacctgcta
gaatctgtccctaagagtatttctgccttacctgtgaatccacatcctgtacctccaagg
gggccaacagacttgcctcccatgcctgtcaccaaaccccttcagatggtcccacgaggt
tctcagctctatccagcacagcaggcggatgtttattaccaggaccctcgaggagctgct
ccgccatttgaaccagcaccgtatcagcagggtatgtactatactccaccgccacagtgt
atgtcccgctttgtcagaccgccaccatctgctcctgaacctggccctccctacttggat
cactatccaccctatctccaggatcgtgtagtaaactcacagtacggcacccagccacaa
cagtacccacctatgtacccaccacactatgatggccgccgtgtgtaccctgctcagtct
tacacaagagaggagattttccgagaaagtcctattcccattgagattccacctgcagca
gtaccatcctatgtgccagaatccagagagagataccaacaggtggagggttactatcca
atggctcctcatccaactcagatcagaccttcgtacatcagagagcctccttatagccgg
cttcctcctcctcctcagccccatcctagtctagatgagctacaccgcagacgaaaggaa
ataatggcccagctagaggaaaggaaggttatctctccacctccttttgcaccttcaccg
acattgcctcctacctttcatcaagaggagtttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattacagccagtattctccctggtcatgtgacaccatcggctcc
tacattggaaccaaagatgcaaaacccaaagatgttgtggcagctgggagtgtggaagtg
atgaatgtagagagtaaaggaatgagagaccagcgattggatcttcaaagaagagcagca
gaaaccagtgatgatgaccttatcccttttggagaccgaccaaccgtatctcggtttggg
gccatctctcgaacctcgaaaacaatatatcagggtgctggtccagtgcagactatggca
cctcagggagctcccacaaaacctattaacatttcagattatagtccatatggaacccac
agtggctggggaggttctccgtattcacctcatcaaaacataccttctcagggacacttc
agtgagagggacagaatgtccatgtcagaagtagccagtcatggaaaaccccttccatct
gctgagcgggaacaactacgactagaattgcagcaactaaaccatcaaattagccagcag
acccagctacgtggactagaggctgttagtaacaggctggtgttgcagagggaggtgagc
accctggcaggccagtcccagcccccaccacctcctccaaaatggcctggaatgatttca
agtgagcagctgagcttggaactgcaccaggtggagagggaaatcgggaagagaacccgg
gaactgagtatggagaaccagtgttctctggacatgaaaagcaaattgaatacaagtaag
caagccgaaaacggacaaccagaaccacaaaataaggttccagctgaggaccttacgttg
acattcagtgatgtaccaaatggatcagctttgacacaagagaatatcagcctcttgtca
aacaagaccagctctctgaacctgtcagaggaccctgagggaggaggtgacaacaatgac
tcacagagatcgggagtcacacccagttctgctccctaa
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integrated database retrieval system
