Crocuta crocuta (spotted hyena): 144231090
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Entry
144231090 CDS
T11532
Symbol
THOC2
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03013
Nucleocytoplasmic transport
ccru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144231090 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
144231090 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccru03019
]
144231090 (THOC2)
03041 Spliceosome [BR:
ccru03041
]
144231090 (THOC2)
Messenger RNA biogenesis [BR:
ccru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
144231090 (THOC2)
Spliceosome [BR:
ccru03041
]
Complex C
Other components
EJC/TREX
144231090 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
144231090 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
144231090
NCBI-ProteinID:
XP_077619620
LinkDB
All DBs
Position
Unknown
AA seq
1712 aa
AA seq
DB search
MEVWATPPGSVSCATEMLTEDSLYTFLHPALSPDPYELRLPGSRHRIAAFSSYRPMGSVG
LGMLMSSCVASPEVLHRPLSISLDPADTPVHGSVIKLLHLCRILSENKSHDSSTYRDFQQ
ALYELSYHVIKGNLKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYF
TQLVLACLYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLRE
ENEGYAKLIAELGQDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDF
FISLLESYMSMCEPQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVH
LLPADNCIMDEHKREIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLG
LLEALLKIGDWQHAQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVLYSIYKFCF
XAKGSPVNALQNKRAPKQAESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKE
FQSDGSKQEDKEKKLRDQKNPMCLIFEVILSCLLSITDQVLLPSLSLMDCNACMSEELWG
MFKTFPYQHRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGN
LRHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKH
DDTTISSWLQSLASFCGAVFRKYPIDLAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIE
ITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQR
NGVIFQEGGEKHLKLVGKLYDQASXSLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTP
HDAAFFLSRPMYAHHISSKYDELKKSEKGSKQQHKVHKYITSCEMVMAPVHEAVVSLHVS
KVWDDISPQFYATFWSLTMYDLAVPHTSYEREVNKLKVQMKAIDDNQEMPPNKKKKEKER
CTALQDKLLEEEKKQMEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSA
IDAVYCARFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETV
TRWHSDRATYEKVWLINTLTFYPLLFKKXGFDGGNKADQLDYENFRHVVHKWHYKLTKAS
VHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMG
YSGQLKSRKSYMIPENEFHHKDPPPRNAVASVQNGPGGGPSSSSAGSASKSDESSTEETD
KSRERSQCGVKAVNKASSATPKGNSSNGNSGSNSSKAVKENDKEKGKEKEKEKKEKTPAT
TPEARVLGKDGKEKPKEERPNKDEKARETKERTPKSDKEKEKFKKEEKAKDEKFKTTIPN
IESKSTQEKEREKEPSRERDIAKEMKSKENAKGGEKTPVSGSLKSPVPRSDVAEPEREQK
RRKIDTHPSPSHSSTVKVTAILPKVPLGSENYASSPVISIHFLQDSLIELKESSAKLYLN
HTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLAKRRK
EENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKES
RHDKEKIEKKEKRDSSGGKEEKKHHKSSDKHR
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttgggccactccaccagggagcgtgtcctgtgctaccgagatgctgacggag
gattcgctgtacacctttctccaccctgctctctcccctgacccatatgaactgcgtttg
ccgggctcccggcatcgcatcgcggctttcagtagctatcggccaatgggaagtgttggt
ttggggatgctaatgtcttcctgcgttgctagccctgaggtgcttcaccgaccattgtcg
atttcccttgatcctgcggacacccctgtgcatggttccgtcattaaacttttgcattta
tgccggatcctcagtgaaaataaaagccatgatagttcaacttacagagatttccagcaa
gctctttatgaattgtcataccatgtcattaaaggaaatctaaagcatgaacaggcatct
aatgttcttagtgatattagtgaatttcgtgaggatatgccctccattcttgctgatgta
ttctgcatattagatattgagacaaattgtttagaagaaaaaagcaagagagactatttt
acacaattggtattagcatgtttgtatttagtttcagacacagttctaaaggaacgcctg
gatccagaaacattggaatcattagggcttattaaacaatcacagcagttcaatcaaaag
tcagttaaaatcaagacaaagctcttttataagcagcaaaaattcaacttattaagagaa
gagaatgaaggttatgccaagctgattgctgaattggggcaagatttatctggaaatatt
actagtgatttaatcttagaaaatataaaatctttaataggatgctttaatctggatccc
aatagagttttggatgtcattttagaagtgtttgaatgcaggccagaacatgatgacttc
tttatatctttattagaatcttacatgagtatgtgtgaaccgcaaacactgtgtcatatt
cttgggttcaaattcaagttttaccaggaaccaaatggagagactccttcatctttatac
agagttgcagcagtacttctacagtttaatcttattgatttagatgatctttatgtacat
cttcttccagctgataattgcattatggatgaacacaaacgagaaattgtggaagctaag
cagattgttagaaaacttacaatggttgtattgtcttctgaaaaaatcgatgagcgagag
aaagaaaaggaaaaagaagaggagaaagtagagaagccacctgacaaccaaaaacttggt
ttgttggaagccttgttgaagattggtgattggcagcatgcgcagaacattatggatcag
atgcctccctactatgcagcttcacataagctaatagctcttgctatttgcaagctcatt
cacataactatagagcctctctaccgaagggtattatatagtatatataaattttgcttc
ttngctaaaggctcacctgttaatgctttgcaaaacaagagagcaccaaaacaagcagag
agctttgaagatttgaggagagatgtcttcaatatgttctgttaccttggtcctcacctt
tctcatgatccaattttatttgcaaaagtggtgcgcataggcaagtcatttatgaaagag
tttcagtctgatggaagcaaacaagaagataaagagaaaaagttaagagaccagaaaaat
ccaatgtgtctgatatttgaagttatccttagctgtttacttagcattactgaccaggta
ctacttccatctctttctttgatggactgcaatgcttgtatgtctgaggaactatgggga
atgtttaaaacatttccatatcagcatagatatcgtctgtatggccagtggaagaatgaa
acttataacagtcacccacttttagtaaaagttaaagcccaaacaatagacagagccaaa
tatatcatgaagcgtctaaccaaggaaaatgtgaagccttctggaagacaaattgggaat
ttgaggcacagcaatccaaccattttgtttgattatatcttgtcacaaatacagaaatat
gataacttaataacacctgtagtagattcattgaaatacctcacttctttgaattatgat
gttttggcctattgtatcattgaagctttagctaatccggaaaaggagagaatgaaacac
gacgacacaaccatctcaagctggcttcagagtctggctagtttctgtggtgcagttttt
cgtaaatatccaattgatcttgctggtcttcttcaatatgtggctaatcagctaaaggca
ggcaaaagttttgacctgcttatattgaaagaagtggtacaaaaaatggcaggaatagaa
attacagaggaaatgacgatggagcagctagaggccatgactggtggagagcaactaaaa
gctgagggtggttattttggccagatcagaaacactaaaaaatcgtcccagagattaaaa
gatgcactattggaccatgatcttgctcttcctctctgtttgcttatggctcagcagagg
aatggggtaatcttccaggaaggtggagagaaacatttgaaacttgtgggaaaactctat
gatcaggcaagttaaagcctggtacagtttggtgggtttttagcatctaatctaagcaca
gaagattatataaagcgagtgccttcaattgatgtgctctgtaacgaatttcatacaccc
catgatgcagcatttttcctgtctaggccaatgtatgcacaccacatttcgtcgaagtat
gatgaacttaaaaaatcagaaaaaggaagtaaacagcaacataaagttcacaagtacatt
acatcgtgtgaaatggtgatggctcctgtccatgaagcagtggtctccttacatgtttcc
aaagtctgggatgacatcagccctcaattctatgccacgttctggtcattgacaatgtat
gaccttgcagttccacacaccagctatgaacgggaagtcaataagcttaaagtccagatg
aaagcaattgatgacaatcaggaaatgcctccaaataaaaagaaaaaggagaaggagcgt
tgtactgcccttcaggacaagcttcttgaagaagaaaagaaacagatggaacatgtacag
cgagttctacagagactgaaactggaaaaggacaactggcttttagcaaaatctaccaaa
aatgagaccatcacaaaatttctacagctgtgtatatttcctcgatgtattttttcagca
attgatgctgtttactgtgctcgttttgttgaattggtacatcaacagaaaactccaaat
ttttccacacttctttgctatgatcgagttttctctgatataatttacacagttgcaagc
tgtacagaaaatgaagcgagtcgatatgggcgatttctttgctgcatgttagagactgtg
accaggtggcacagtgatcgagccacatatgaaaaggtatggctaataaacacccttaca
ttttacccattgctgtttaaaaaanctggatttgatggtggaaataaagctgatcaatta
gactatgaaaattttcgacatgttgtgcataaatggcattacaaactaaccaaggcatcg
gtacattgccttgaaacaggcgaatatactcacatcaggaatattttgattgtgctaaca
aaaatacttccttggtacccaaaagttttgaatctgggtcaggctttggaaagaagagtg
cataaaatctgccaagaagaaaaagagaagaggccagatctatatgcattggctatgggc
tactctgggcagttgaaaagtagaaagtcatacatgatacctgaaaatgagtttcatcac
aaagacccccctccgaggaatgcggttgccagtgtacagaatgggcctgggggtgggcct
tcttcatcgtcggcaggaagtgcatccaaatcggatgaaagcagtactgaggagactgat
aaatcaagggagagatctcagtgtggtgtgaaagctgttaataaagcttctagtgccaca
ccaaaagggaattcaagcaatggaaacagtggctctaacagcagcaaagctgttaaagaa
aatgataaagaaaaagggaaagagaaagaaaaagagaaaaaagaaaagactccagctact
actccagaggccagggtacttggtaaagatggtaaagaaaaaccgaaggaagagcggcca
aataaagatgaaaaagcaagagagacgaaggaaagaacacctaagtctgataaagagaaa
gaaaaattcaagaaggaagaaaaagctaaagatgagaaattcaaaaccaccatccccaac
atagaatcaaaatcaactcaagaaaaggaaagagagaaggagccatccagagaaagagat
atagcaaaggaaatgaaatcaaaggaaaatgctaaaggaggagaaaaaacaccagtttct
gggtccttgaagtcacctgttccccgatcagatgttgcagagcctgaaagggaacaaaaa
cgccgcaaaattgatacccacccttctccatcgcattcctcaacagtaaaggttacagcc
atacttcccaaagttcctctgggttctgagaactatgccagctcacctgtcatctccatt
cattttctacaggacagtctcatcgaactcaaggagtcttcagcaaagctctaccttaat
catactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagacttggac
aagtcaagggaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagagcgg
aaaagggatcattcaaacaatgaccgtgaagtgccaccggacttagccaagaggcgaaaa
gaggaaaatggaacaatgggggtttcaaaacacaaaagtgaaagtccatgtgagtctcct
tatccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaaggc
ggcgattcgtttaaatctgaaaagatggataaaatctcctctggtggcaaaaaggagtcc
aggcatgataaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaaggaa
gagaagaaacatcataagtcctcggacaagcacagataa
DBGET
integrated database retrieval system
