Crocuta crocuta (spotted hyena): 144231961
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Entry
144231961 CDS
T11532
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru04140
Autophagy - animal
ccru04148
Efferocytosis
ccru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
144231961 (VPS18)
04148 Efferocytosis
144231961 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
144231961 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccru04131
]
144231961 (VPS18)
Membrane trafficking [BR:
ccru04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
144231961 (VPS18)
Hops complex
144231961 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
144231961
NCBI-ProteinID:
XP_077620788
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDARVHKMFLDHTGCHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPEGRGFVIATTRQRLFQFIGRPAEGAE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAVVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLAGL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALNFYRETRERFRAFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNELGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPAPTKGSARAKEAEGGAAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQHYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgaatatgaggactctctgtcccgctcagccgtcttgcagccc
ggctgccccagcgtgggcatcccccattcggggtatgtgaatgcccagctagagaaggaa
gtgcccatcttcacaaagcagcgcattgactttaccccttctgagcgtatcaccagtctt
gtcgtctcctgcaatcagctctgcatgagcctgggcaaggacacactgctccgcattgat
ttgggcaaggccaatgaacccaaccatgtggagctaggacgcaaggatgacgccagagtt
cacaagatgtttctggaccatactggctgtcacctgctgattgctctgagcagcactgag
gtcctctacgtgaaccgtaatggacagaaggttcggccactggcacgctggaaagggcag
ctggtggagagtgtgggctggaacaaggcactgggcaccgagagcagcacaggccccatc
ttggtcggcactgcccaaggccagatcttcgaagcagagctctcagccagcgagggtggg
cttttcggccctgcaccagatctttacttccgcccattgtacgtactaaatgaagaaggg
ggtccggcgcctgtgtgctcccttgaggccgagcggggtcccgaggggcgtggctttgtt
atcgccacaactcggcagcgcctcttccagttcataggtcgaccagctgagggggctgaa
gcccagggcttctcagggctcttcgctgcctacgctgaccacccacccccattccgtgag
ttccccagcagtttgggctacagcgagttggccttctatacccccaagttgcgctctgca
cctcgggccttcgcctggatgatgggggatggcgtgttgtatggagcattggactgtgga
cgccccgattcgctgctgagtgaggagcgagtctgggagtacccagagggggtaggtcct
ggggccagcccacccctggctgtggtcctgacccagttccacttcctgctgctgttggcg
gaccgggtagaggcagtgtgcacactgacggggcaggtggtgctgcgggatcacttcctg
gagaagtttgggccactgaagcacatggtgaaggactcttccaccggccatctgtgggct
tacactgagcgggccgtcttccgctaccacgtgcagcgggaggcccgggatgtctggcgc
acctacctggacatgaaccgctttgatctggccaaagagtactgtcgagagaggcctgac
tgcctggacacggtcctggcccgggaggctgatttctgctttcgccagcgtcgttacctg
gagagcgcccgctgctacgccctgacccagagctactttgaggagattgccctcaagttc
ttggaggcccgacaggaggaggctctggctgagttcctgcagcgaaaattggccggtttg
aagccagccgagcgtacccaggccaccttgcttaccacctggctgacagagctttacctg
agccgccttggggctctacagggtgatcctgaggccctgaacttctaccgggaaacacgg
gagcgtttccgggccttcctcagcagcccccgccacaaggagtggctctttgccagccgg
gcctccatccatgaactgcttgccagccacggggacacggagcacatggtgtactttgcc
gtcatcatgcaggactacgagcgggtggtggcgtaccactgccagcatgaggcctatgag
gaggccctggccgtgcttgctcgtcaccgtgaccctcagcttttctataagttctcaccc
atcctcattcgtcacatcccccgccagctggtagatgcttggattgagctgggcagccgg
ctagatgcccggcagctcattcccgccctggtgaattatagccagggtggcgaggcccag
caggtaagccaggccattcgctacatggagttctgcgtgaatgagctgggcgagactgaa
caggccattcacaactatctgctgtcgctgtatgcccgaggccagcccgcctcactgctg
gcctaccttgagcaggccggggccagcccacaccgtgtgcattacgacctcaagtatgcg
ctgcggctctgtgctgagcatggccaccaccgtgcttgtgtccatgtctacaaggtccta
gagctgtacgaggaggctgtggacctggccctgcaggtggacgtggacctggccaaacag
tgtgctgacttgcccgaggaagacgaggaattgcgcaagaaactgtggctgaagattgca
cggcacgtggtgcaggaggaagaagatgtgcagacagccatggcctgcctggccagctgc
cccttgctcaagattgaggatgtcctgcccttctttcctgactttgtcactatcgaccac
ttcaaagaggcgatctgcagctcactcaaggcctacaaccaccacatccaggagctgcag
cgggagatggaagaggccacagccagcgcccagcgcatccggcgagacctgcaagagctg
cggggccgctacggcacagtggagccccaggacaaatgtgctacctgcgacttccccctg
ctcaaccgccctttttaccttttcctctgtggccacatgttccacgctgactgcttgctg
caggccgtgcggcctggcctgccggcctacaagcaggcccggcttgaggagcttcagcgc
aagttgggggctgcaccagcccctaccaagggctctgcccgcgcaaaggaggccgagggt
ggggctgccgctgggggccccagtcgggaacagctcaaggcagacctggatgaactggtg
gctgctgagtgcgtgtactgtggggagctgatgatccgctctattgaccggcccttcatt
gacccccagcactacgaggaggagcaccttagttggctgtag
DBGET
integrated database retrieval system
