KEGG   Crocuta crocuta (spotted hyena): 144232385
Entry
144232385         CDS       T11532                                 
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
  KO
K12600  superkiller protein 3
Organism
ccru  Crocuta crocuta (spotted hyena)
Pathway
ccru03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    144232385 (SKIC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccru03019]
    144232385 (SKIC3)
Messenger RNA biogenesis [BR:ccru03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     144232385 (SKIC3)
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_16 TPR_19 TPR_17 TPR_14 TPR_8 TPR_11 TPR_CcmH_CycH TPR_12 CFAP70_TPR_C CFAP70_mid_TPR ANAPC3 TPR_9 CABIN1_N TTC22_N ARM_TT21_C Fis1_TPR_C Sel1 ARM_TT21_5th ARM_TT21_2nd TPR_6 TPR_Slam TPR_5 TPR_20 TPR_30 IFT70_C TPR_15 TPR_Psidin_N BTAD HAT_Syf1_M
Other DBs
NCBI-GeneID: 144232385
NCBI-ProteinID: XP_077621351
LinkDB
Position
Unknown
AA seq 1564 aa
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYRKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHTEVARTWHKLIKTRQEEGADNQELYQLWRRLTQLLAESTEDQNNETQQ
LLLTAFENALGLSEKIPSEDHQVLYRHFIQCLSKFPHETARLKKACEGMINIYPTVQYPL
EVLCLHLIESGSLSDEGQEYCRRLVEMDPKSGPGFIGLGIKALQDKKYEDAIRNLMEGLK
ESPLCTTGWYHLAEAQVKMHRPKEAVLSCNQALKNIDNLGVSDGSLHQKNLCLRLKAEAL
IKLSDYESSVEALCTLDQVSDANNIPGLLVLKSLAYLNKGSLDEASKIMEDLLSSYPDLA
EVHALEALIHFTKKDYPQAEKCFQRALEKDPEVAEYHYQLGLTYWFMDEETRKDKTKALT
HFLKAARLDTYMGKVFCYLGHYYRDVVGDKNRARGCYRKAFELDDTDSESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAIAQYQLIIK
KKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTWALQHRADVSCLWKLA
GDACTSLYAVSPSKVNVHVLGVLLGQKEGKQALKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLTETGNNTNDPKELLEKSLQCLKKAVRLDSKNHLYWNALGVVSCYSGI
GNYALAQHCFIKSIQSEQINPVAWTNLGVLYLGNENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRDTELYRYNIIQMN
AIPAAQVVLSKYIERIQNYAPAFTMLGYLNEHLQLKKEAADAYQRGMLLLQSAEDQDTYN
VTVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSI
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSILKEPTAESLQALCALGLTMQDPTL
SKAALNELLKHIKQKDSEYHKCLLSSAIYALQGRSVAVQRQASKAVHSNPADPALWSLLS
RVVAQYTHRSAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGTSSAEAEKNIALKTIQ
KAALLSPGDPAVWAGLMAACHADDKLALVNNTEPKRMDLYLALLSAVSASIKDKEFLENY
NQSLETWSLSQAVTGLIDTGRISEAEALCTKNLKSNPDQPAVILLLRQVQCKPLLDSQNP
LSDAVLEELQKTVMSNSTSVPAWQWLAYVYQCQGMMGAAEMCYRKSLQVASQQGSWSGKL
SSLLRLALLALKAYMANTANDHWSSLVQEATTEALKLCFCPLAVFLQALLQFNRKMGARE
TRRLLERVVYQPGYPKSIVSTARWYLLRHLHAKNDYELIDVLVNNAKTHGDTRALELNQK
LSSQ
NT seq 4695 nt   +upstreamnt  +downstreamnt
atgtccagcaaggaagtaaagactgctctaaaaagcgctagggatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttgaaacaagagaaaaataactac
aatgcctgggtttttattggtgttgctgcagctgagctagaacaacctgatcaggcccag
ggtgcctataagaaagctgctgaactagagccagaccaattactggcttggcaggggtta
gcaagcttatatgagaaatgtaatcacataaatgctaaggatgacttacccggtgtttac
cgaaagctgctagatctttatgaaagtgttgacaaacagaagtggtgcgatgtctgtaag
aaacttgtggatctgtattaccaagaaaagaaacacacagaggtggcccgaacatggcac
aaattgataaagacacggcaggaggaaggtgcagacaaccaagagctttatcagctctgg
aggagattgactcagttgctggctgagagtacggaggatcagaataatgagactcagcaa
ttgcttttaactgcttttgagaatgcactgggcttatcagaaaagattcctagtgaagat
caccaagtactttatagacatttcattcagtgtttatctaaatttcctcatgagactgct
aggttgaagaaggcctgtgaaggaatgataaacatctatcccactgtacaatatccatta
gaagtgctttgtttgcatttaattgaatcaggcagtctttctgatgaaggacaagagtat
tgtcgcagactagtggaaatggatccaaaaagtggtccaggcttcattggtttgggaatt
aaagcattacaagacaaaaagtatgaagatgctattaggaacctaatggaagggttaaag
gaaagccctctttgcacaactgggtggtatcatctggcagaagcccaagttaaaatgcat
agacctaaggaagctgttctttcatgcaatcaagctctgaagaacatagataatcttggt
gtgtctgatggcagtcttcatcagaagaatctttgtctccgtttgaaagcagaggctttg
attaaactctcagattatgaatcttcagtggaagcactttgtactcttgatcaggtttct
gatgcaaataatattccaggacttctggttcttaaaagcttggcctatctgaataaaggc
tcattggatgaagcttcaaagattatggaagaccttctctcttcttaccctgacctagct
gaagttcatgccctggaggctttaattcattttaccaaaaaggactatccacaagcggag
aaatgtttccagagagctcttgagaaagatcctgaagttgcggaatatcattaccaactt
gggttaacatattggttcatggatgaagaaacaagaaaagataaaacaaaggctcttact
cactttctaaaggctgccagattggatacatacatgggcaaagttttctgctatttaggt
cattactacagagatgtggtaggagataaaaacagagcccgtggctgttacaggaaagct
tttgaattagatgatactgactctgaatctggagctgcagcagttgacttaagtgtggag
cttgaagagatggaaactgccttagctatcctaacaacagtaactcaaaaggcaagcgct
ggaacggcaaaatgggcctggcttaggcgcggactgtactatttgaaagctggtcagcat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgt
tgggagtcattaggagaggcatacttaagcagaggtggctatacgacagccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggttgcagca
atacagcaaatcctaggcaaatataaggaggcgatagctcaataccagctgatcattaaa
aagaaagaagattatgtgccagctttgaaaggtttgggcgaatgccatcttatgatggca
aaagcggctctagtggattatcttgatggaaaagctgtggactacatagaaaaagccctg
gaatattttacttgggctctgcagcaccgagctgatgtgtcttgcctttggaagctagct
ggggatgcttgtaccagtctgtatgctgtctcaccatctaaagtaaacgttcatgtttta
ggagtcctcctaggtcagaaagaaggaaaacaagcattaaagaagaatgaactcctccat
ctgggaggaaggtgttatggtcgtgcattgaaactcatgtctacatctaatacatggtgt
gatcttggaattaattattatcgtcaagcacaacatctaacagaaacaggcaacaacacg
aatgatcctaaagagttgttagagaaatctttacagtgtctgaaaaaggcagtgagactt
gacagtaaaaaccatttatactggaatgctcttggtgtggtttcatgttacagtggtatt
ggaaattatgcccttgctcagcattgtttcatcaagtcaatccaatcagaacaaattaat
cctgttgcatggaccaacttaggagtgttataccttggaaatgaaaacattgagcaagct
catgaagctttcaaaatggcacaatcccttgatccatcttacttaatgtgctggattgga
caagctcttatcgcagagacagttggaagttatgacaccatggatcttttcaggcacact
acagaactcagtatgcataccgagggagcaataggttatgcttattgggtctgtacaaca
ttgcaagataaaagcaacagagatactgagctgtaccggtacaacatcattcagatgaat
gctattccagcagcacaagtggttttgagtaaatacatagaaagaattcagaattatgct
ccagctttcacaatgttgggttacttaaatgaacatctacaactgaaaaaagaagcagca
gatgcataccaaagaggaatgttactgttacaaagtgcagaagaccaagatacttataat
gttacagttagaaattatggcagattgttatgttccattggtgaatatgataaagctatc
caggcttttaagtcaacacctcttgaagagttagaagacatcataggttttgcattggct
ttatttatgaaaggtctatataaggaaagcagcaaagcctatgaaagagccttgtctatt
gttgaatcagaacaggacaaagcgcatatcttgacagctctggcaataacggagtataaa
cagggaaaaatggacgtagccaagacattgctatttaaatgctctatcttaaaggaacca
actgcagaaagccttcaagccttatgtgctctaggtttgacaatgcaggatccaacactg
tcaaaagcagcacttaatgaattactgaagcacatcaaacagaaagacagtgaatatcac
aagtgccttctttcatcagcaatttatgccctacaaggccgcagtgtggcagtgcagaga
caggcatctaaagctgttcacagtaacccagctgatcctgctctttggtctctgttgtcc
cgggtagttgctcagtatactcaccgaagtgcaaagggaggtgctgtagcaggaaacgtg
gctcatattttggactcaaatcatggaaagaaggcattactgtacactgcagtaaatcag
ttagctatgggaaccagttcagcagaagctgaaaaaaatattgcactaaagaccattcag
aaagcagctcttctttctccaggtgatcctgctgtctgggctgggctaatggcagcctgt
catgctgatgataaactggctctagtgaacaacactgagccaaagagaatggatttgtac
ttggcactgttatctgctgtttctgcttcaattaaagacaaagaattccttgaaaattat
aaccagtctcttgaaacgtggtctctatcccaagctgtcactggtttaatagacacagga
agaatatctgaagctgaagccctctgcacaaagaatttaaaaagtaaccctgatcagcca
gctgtcatcttgcttttgagacaagttcagtgtaaaccactcctggattcacaaaaccct
ctctcagacgctgtacttgaagagctgcaaaaaacagttatgtccaattcaacctctgtc
ccagcatggcagtggctggcatacgtgtatcagtgccaaggcatgatgggtgctgcagag
atgtgttatagaaagagtctacaagtagcatcccagcagggcagttggagtgggaagctg
tcaagtctgctgagactagctctacttgctttaaaagcctacatggctaatactgccaat
gatcactggtcatctttggttcaagaagcaacaactgaggccttgaaactttgcttttgt
ccattggctgtatttttacaagctttgttacaattcaaccgcaaaatgggagcaagagag
acacggcggcttttggaaagagtggtgtatcaacctggatatcctaagtctattgtatca
actgcacgttggtacctgctgagacacttacatgccaaaaatgactacgagcttattgat
gtgctggtaaacaatgccaaaactcatggagatacaagagcgttggaattgaatcagaaa
ttgtcctcacagtaa

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