Crocuta crocuta (spotted hyena): 144232385
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Entry
144232385 CDS
T11532
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
144232385 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccru03019
]
144232385 (SKIC3)
Messenger RNA biogenesis [BR:
ccru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
144232385 (SKIC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_19
TPR_17
TPR_14
TPR_8
TPR_11
TPR_CcmH_CycH
TPR_12
CFAP70_TPR_C
CFAP70_mid_TPR
ANAPC3
TPR_9
CABIN1_N
TTC22_N
ARM_TT21_C
Fis1_TPR_C
Sel1
ARM_TT21_5th
ARM_TT21_2nd
TPR_6
TPR_Slam
TPR_5
TPR_20
TPR_30
IFT70_C
TPR_15
TPR_Psidin_N
BTAD
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
144232385
NCBI-ProteinID:
XP_077621351
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYRKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHTEVARTWHKLIKTRQEEGADNQELYQLWRRLTQLLAESTEDQNNETQQ
LLLTAFENALGLSEKIPSEDHQVLYRHFIQCLSKFPHETARLKKACEGMINIYPTVQYPL
EVLCLHLIESGSLSDEGQEYCRRLVEMDPKSGPGFIGLGIKALQDKKYEDAIRNLMEGLK
ESPLCTTGWYHLAEAQVKMHRPKEAVLSCNQALKNIDNLGVSDGSLHQKNLCLRLKAEAL
IKLSDYESSVEALCTLDQVSDANNIPGLLVLKSLAYLNKGSLDEASKIMEDLLSSYPDLA
EVHALEALIHFTKKDYPQAEKCFQRALEKDPEVAEYHYQLGLTYWFMDEETRKDKTKALT
HFLKAARLDTYMGKVFCYLGHYYRDVVGDKNRARGCYRKAFELDDTDSESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAIAQYQLIIK
KKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTWALQHRADVSCLWKLA
GDACTSLYAVSPSKVNVHVLGVLLGQKEGKQALKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLTETGNNTNDPKELLEKSLQCLKKAVRLDSKNHLYWNALGVVSCYSGI
GNYALAQHCFIKSIQSEQINPVAWTNLGVLYLGNENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRDTELYRYNIIQMN
AIPAAQVVLSKYIERIQNYAPAFTMLGYLNEHLQLKKEAADAYQRGMLLLQSAEDQDTYN
VTVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSI
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSILKEPTAESLQALCALGLTMQDPTL
SKAALNELLKHIKQKDSEYHKCLLSSAIYALQGRSVAVQRQASKAVHSNPADPALWSLLS
RVVAQYTHRSAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGTSSAEAEKNIALKTIQ
KAALLSPGDPAVWAGLMAACHADDKLALVNNTEPKRMDLYLALLSAVSASIKDKEFLENY
NQSLETWSLSQAVTGLIDTGRISEAEALCTKNLKSNPDQPAVILLLRQVQCKPLLDSQNP
LSDAVLEELQKTVMSNSTSVPAWQWLAYVYQCQGMMGAAEMCYRKSLQVASQQGSWSGKL
SSLLRLALLALKAYMANTANDHWSSLVQEATTEALKLCFCPLAVFLQALLQFNRKMGARE
TRRLLERVVYQPGYPKSIVSTARWYLLRHLHAKNDYELIDVLVNNAKTHGDTRALELNQK
LSSQ
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtaaagactgctctaaaaagcgctagggatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttgaaacaagagaaaaataactac
aatgcctgggtttttattggtgttgctgcagctgagctagaacaacctgatcaggcccag
ggtgcctataagaaagctgctgaactagagccagaccaattactggcttggcaggggtta
gcaagcttatatgagaaatgtaatcacataaatgctaaggatgacttacccggtgtttac
cgaaagctgctagatctttatgaaagtgttgacaaacagaagtggtgcgatgtctgtaag
aaacttgtggatctgtattaccaagaaaagaaacacacagaggtggcccgaacatggcac
aaattgataaagacacggcaggaggaaggtgcagacaaccaagagctttatcagctctgg
aggagattgactcagttgctggctgagagtacggaggatcagaataatgagactcagcaa
ttgcttttaactgcttttgagaatgcactgggcttatcagaaaagattcctagtgaagat
caccaagtactttatagacatttcattcagtgtttatctaaatttcctcatgagactgct
aggttgaagaaggcctgtgaaggaatgataaacatctatcccactgtacaatatccatta
gaagtgctttgtttgcatttaattgaatcaggcagtctttctgatgaaggacaagagtat
tgtcgcagactagtggaaatggatccaaaaagtggtccaggcttcattggtttgggaatt
aaagcattacaagacaaaaagtatgaagatgctattaggaacctaatggaagggttaaag
gaaagccctctttgcacaactgggtggtatcatctggcagaagcccaagttaaaatgcat
agacctaaggaagctgttctttcatgcaatcaagctctgaagaacatagataatcttggt
gtgtctgatggcagtcttcatcagaagaatctttgtctccgtttgaaagcagaggctttg
attaaactctcagattatgaatcttcagtggaagcactttgtactcttgatcaggtttct
gatgcaaataatattccaggacttctggttcttaaaagcttggcctatctgaataaaggc
tcattggatgaagcttcaaagattatggaagaccttctctcttcttaccctgacctagct
gaagttcatgccctggaggctttaattcattttaccaaaaaggactatccacaagcggag
aaatgtttccagagagctcttgagaaagatcctgaagttgcggaatatcattaccaactt
gggttaacatattggttcatggatgaagaaacaagaaaagataaaacaaaggctcttact
cactttctaaaggctgccagattggatacatacatgggcaaagttttctgctatttaggt
cattactacagagatgtggtaggagataaaaacagagcccgtggctgttacaggaaagct
tttgaattagatgatactgactctgaatctggagctgcagcagttgacttaagtgtggag
cttgaagagatggaaactgccttagctatcctaacaacagtaactcaaaaggcaagcgct
ggaacggcaaaatgggcctggcttaggcgcggactgtactatttgaaagctggtcagcat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgt
tgggagtcattaggagaggcatacttaagcagaggtggctatacgacagccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggttgcagca
atacagcaaatcctaggcaaatataaggaggcgatagctcaataccagctgatcattaaa
aagaaagaagattatgtgccagctttgaaaggtttgggcgaatgccatcttatgatggca
aaagcggctctagtggattatcttgatggaaaagctgtggactacatagaaaaagccctg
gaatattttacttgggctctgcagcaccgagctgatgtgtcttgcctttggaagctagct
ggggatgcttgtaccagtctgtatgctgtctcaccatctaaagtaaacgttcatgtttta
ggagtcctcctaggtcagaaagaaggaaaacaagcattaaagaagaatgaactcctccat
ctgggaggaaggtgttatggtcgtgcattgaaactcatgtctacatctaatacatggtgt
gatcttggaattaattattatcgtcaagcacaacatctaacagaaacaggcaacaacacg
aatgatcctaaagagttgttagagaaatctttacagtgtctgaaaaaggcagtgagactt
gacagtaaaaaccatttatactggaatgctcttggtgtggtttcatgttacagtggtatt
ggaaattatgcccttgctcagcattgtttcatcaagtcaatccaatcagaacaaattaat
cctgttgcatggaccaacttaggagtgttataccttggaaatgaaaacattgagcaagct
catgaagctttcaaaatggcacaatcccttgatccatcttacttaatgtgctggattgga
caagctcttatcgcagagacagttggaagttatgacaccatggatcttttcaggcacact
acagaactcagtatgcataccgagggagcaataggttatgcttattgggtctgtacaaca
ttgcaagataaaagcaacagagatactgagctgtaccggtacaacatcattcagatgaat
gctattccagcagcacaagtggttttgagtaaatacatagaaagaattcagaattatgct
ccagctttcacaatgttgggttacttaaatgaacatctacaactgaaaaaagaagcagca
gatgcataccaaagaggaatgttactgttacaaagtgcagaagaccaagatacttataat
gttacagttagaaattatggcagattgttatgttccattggtgaatatgataaagctatc
caggcttttaagtcaacacctcttgaagagttagaagacatcataggttttgcattggct
ttatttatgaaaggtctatataaggaaagcagcaaagcctatgaaagagccttgtctatt
gttgaatcagaacaggacaaagcgcatatcttgacagctctggcaataacggagtataaa
cagggaaaaatggacgtagccaagacattgctatttaaatgctctatcttaaaggaacca
actgcagaaagccttcaagccttatgtgctctaggtttgacaatgcaggatccaacactg
tcaaaagcagcacttaatgaattactgaagcacatcaaacagaaagacagtgaatatcac
aagtgccttctttcatcagcaatttatgccctacaaggccgcagtgtggcagtgcagaga
caggcatctaaagctgttcacagtaacccagctgatcctgctctttggtctctgttgtcc
cgggtagttgctcagtatactcaccgaagtgcaaagggaggtgctgtagcaggaaacgtg
gctcatattttggactcaaatcatggaaagaaggcattactgtacactgcagtaaatcag
ttagctatgggaaccagttcagcagaagctgaaaaaaatattgcactaaagaccattcag
aaagcagctcttctttctccaggtgatcctgctgtctgggctgggctaatggcagcctgt
catgctgatgataaactggctctagtgaacaacactgagccaaagagaatggatttgtac
ttggcactgttatctgctgtttctgcttcaattaaagacaaagaattccttgaaaattat
aaccagtctcttgaaacgtggtctctatcccaagctgtcactggtttaatagacacagga
agaatatctgaagctgaagccctctgcacaaagaatttaaaaagtaaccctgatcagcca
gctgtcatcttgcttttgagacaagttcagtgtaaaccactcctggattcacaaaaccct
ctctcagacgctgtacttgaagagctgcaaaaaacagttatgtccaattcaacctctgtc
ccagcatggcagtggctggcatacgtgtatcagtgccaaggcatgatgggtgctgcagag
atgtgttatagaaagagtctacaagtagcatcccagcagggcagttggagtgggaagctg
tcaagtctgctgagactagctctacttgctttaaaagcctacatggctaatactgccaat
gatcactggtcatctttggttcaagaagcaacaactgaggccttgaaactttgcttttgt
ccattggctgtatttttacaagctttgttacaattcaaccgcaaaatgggagcaagagag
acacggcggcttttggaaagagtggtgtatcaacctggatatcctaagtctattgtatca
actgcacgttggtacctgctgagacacttacatgccaaaaatgactacgagcttattgat
gtgctggtaaacaatgccaaaactcatggagatacaagagcgttggaattgaatcagaaa
ttgtcctcacagtaa
DBGET
integrated database retrieval system