Crocuta crocuta (spotted hyena): 144233196
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Entry
144233196 CDS
T11532
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03030
DNA replication
ccru03410
Base excision repair
ccru03420
Nucleotide excision repair
ccru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
144233196 (RFC5)
03410 Base excision repair
144233196 (RFC5)
03420 Nucleotide excision repair
144233196 (RFC5)
03430 Mismatch repair
144233196 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccru03032
]
144233196 (RFC5)
03036 Chromosome and associated proteins [BR:
ccru03036
]
144233196 (RFC5)
03400 DNA repair and recombination proteins [BR:
ccru03400
]
144233196 (RFC5)
DNA replication proteins [BR:
ccru03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
144233196 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
144233196 (RFC5)
Chromosome and associated proteins [BR:
ccru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
144233196 (RFC5)
DNA repair and recombination proteins [BR:
ccru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
144233196 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
144233196 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_24
AAA_11
AAA_22
AAA_16
AAA_assoc_2
RuvB_N
AAA_lid_RFC1
DEAD
AAA_14
DUF815
nSTAND_NTPase5
ResIII
AAA_5
AAA_19
ATPase_2
AAA_30
TniB
PhoH
TIP49
AAA_7
nSTAND3
DNAX_ATPase_lid
Thioredoxin_6
IstB_IS21
bpMoxR
NPHP3_N
ABC_tran
AAA_3
AAA_28
Motif
Other DBs
NCBI-GeneID:
144233196
NCBI-ProteinID:
XP_077622154
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
METSARQEQQQPAAAKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVAQEEKVDLSEDGLKAVVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNITELKTLKGLALHDILTEIHLFVHRVDFPSSVRVH
LLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVTET
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcagcgaggcaggagcagcagcagcccgcggcggccaagatcagaaacctg
ccctgggttgaaaaataccggccacagacgctgaatgatctgatttctcatcaggacatt
ttgagcaccattcagaaatttattagtgaagaccgactgccgcacctgcttctctatggg
cctccagggacaggaaagacctccaccatcctagcctgtgctaaacagctatacaaagat
aaggaatttggctccatggtcttggagctgaatgcttccgacgaccgaggaatagacatc
gttcggggaccaatcctgagcttcgctagcacaaggacaatatttaagaaaggcttcaaa
ctagtgatcttggatgaagctgatgccatgacccaagatgcccagaacgccttgaggaga
gtgattgagaaatttacagaaaataccaggttctgcctcatctgtaactatctgtcgaag
atcatccccgccttgcagtcccgctgcaccaggttccgattcggtcccttgaccccagaa
ctcatggtcccccgcctggaacacgtcgcacaagaagagaaggtggacctaagcgaggac
gggctgaaagccgttgtgacgctttccagcggagacatgcgaagggctctgaacatcctg
cagagcaccaatatggcttttgggaaggtgacagaggagaccgtctacacctgcactggg
cacccgctcaagtcagacatcgccaacattctggactggatgttgaatcaggacttcacg
acagcctacaggaatattacagagttgaaaacgctgaaggggctggcgttacatgatatc
ctgacagagatacacttgtttgtgcacagagttgattttccatcttcagttcgagtacat
ttattgaccaaaatggcagacattgagtacagactttccgttggcaccaatgagaagatt
cagctgagttccctcattgccgctttccaggtcaccagggacctgatcgtcacggagacc
taa
DBGET
integrated database retrieval system