KEGG   Crocuta crocuta (spotted hyena): 144233196
Entry
144233196         CDS       T11532                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
ccru  Crocuta crocuta (spotted hyena)
Pathway
ccru03030  DNA replication
ccru03410  Base excision repair
ccru03420  Nucleotide excision repair
ccru03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    144233196 (RFC5)
   03410 Base excision repair
    144233196 (RFC5)
   03420 Nucleotide excision repair
    144233196 (RFC5)
   03430 Mismatch repair
    144233196 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccru03032]
    144233196 (RFC5)
   03036 Chromosome and associated proteins [BR:ccru03036]
    144233196 (RFC5)
   03400 DNA repair and recombination proteins [BR:ccru03400]
    144233196 (RFC5)
DNA replication proteins [BR:ccru03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    144233196 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    144233196 (RFC5)
Chromosome and associated proteins [BR:ccru03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    144233196 (RFC5)
DNA repair and recombination proteins [BR:ccru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     144233196 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    144233196 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_24 AAA_11 AAA_22 AAA_16 AAA_assoc_2 RuvB_N AAA_lid_RFC1 DEAD AAA_14 DUF815 nSTAND_NTPase5 ResIII AAA_5 AAA_19 ATPase_2 AAA_30 TniB PhoH TIP49 AAA_7 nSTAND3 DNAX_ATPase_lid Thioredoxin_6 IstB_IS21 bpMoxR NPHP3_N ABC_tran AAA_3 AAA_28
Other DBs
NCBI-GeneID: 144233196
NCBI-ProteinID: XP_077622154
LinkDB
Position
Unknown
AA seq 340 aa
METSARQEQQQPAAAKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVAQEEKVDLSEDGLKAVVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNITELKTLKGLALHDILTEIHLFVHRVDFPSSVRVH
LLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVTET
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggagacctcagcgaggcaggagcagcagcagcccgcggcggccaagatcagaaacctg
ccctgggttgaaaaataccggccacagacgctgaatgatctgatttctcatcaggacatt
ttgagcaccattcagaaatttattagtgaagaccgactgccgcacctgcttctctatggg
cctccagggacaggaaagacctccaccatcctagcctgtgctaaacagctatacaaagat
aaggaatttggctccatggtcttggagctgaatgcttccgacgaccgaggaatagacatc
gttcggggaccaatcctgagcttcgctagcacaaggacaatatttaagaaaggcttcaaa
ctagtgatcttggatgaagctgatgccatgacccaagatgcccagaacgccttgaggaga
gtgattgagaaatttacagaaaataccaggttctgcctcatctgtaactatctgtcgaag
atcatccccgccttgcagtcccgctgcaccaggttccgattcggtcccttgaccccagaa
ctcatggtcccccgcctggaacacgtcgcacaagaagagaaggtggacctaagcgaggac
gggctgaaagccgttgtgacgctttccagcggagacatgcgaagggctctgaacatcctg
cagagcaccaatatggcttttgggaaggtgacagaggagaccgtctacacctgcactggg
cacccgctcaagtcagacatcgccaacattctggactggatgttgaatcaggacttcacg
acagcctacaggaatattacagagttgaaaacgctgaaggggctggcgttacatgatatc
ctgacagagatacacttgtttgtgcacagagttgattttccatcttcagttcgagtacat
ttattgaccaaaatggcagacattgagtacagactttccgttggcaccaatgagaagatt
cagctgagttccctcattgccgctttccaggtcaccagggacctgatcgtcacggagacc
taa

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