Crocuta crocuta (spotted hyena): 144236007
Help
Entry
144236007 CDS
T11532
Symbol
HCFC1
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1
KO
K14966
host cell factor 1
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03083
Polycomb repressive complex
ccru04980
Cobalamin transport and metabolism
ccru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
144236007 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
144236007 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
144236007 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccru01009
]
144236007 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccru03036
]
144236007 (HCFC1)
03029 Mitochondrial biogenesis [BR:
ccru03029
]
144236007 (HCFC1)
Protein phosphatases and associated proteins [BR:
ccru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
144236007 (HCFC1)
Chromosome and associated proteins [BR:
ccru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
144236007 (HCFC1)
HMT complexes
COMPASS/SET1 complex
144236007 (HCFC1)
MLL-HCF complex
144236007 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
144236007 (HCFC1)
Mitochondrial biogenesis [BR:
ccru03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
144236007 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_2
Motif
Other DBs
NCBI-GeneID:
144236007
NCBI-ProteinID:
XP_077625736
LinkDB
All DBs
Position
Unknown
AA seq
1760 aa
AA seq
DB search
IVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYG
KYSNDLYELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKN
NIPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGM
SGCRLGDLWTLDIDTLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVA
THEKEWKCTNTLACLNLGPLGVVGSLAPLAHLRPPPSPATXWPLPTTPRLYIWSGRDGYR
KAWNNQVCCKDLWYLETEKPPPPARVQLVRANTNSLEVSWGAVATXPXXXXXXXXXXXXA
PAVQPLTQVGITLLPQAAAAPPTTTAIQVLPTVPGSSISVPTAARTQGVPAVLKVTGPQA
TTGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSSPQMSGMAALAAAAA
ATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPVMVSNPATRMLKTAA
AQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPISVPGGS
ALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGTILKLVTSADGKPTT
IITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQAGATGVSSSPGIKS
PITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPGQPGTILRTVPMGGV
RLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGHSTSASLATPITTLG
TIATLSSQVINPTAITVSAAQTTLTAASGLTTPTITMQPVSQPTQVTLITAPSGVEAQPV
HDLPVSILASPTTEQPTATVTIADSGQGEVQPGTVTLVCSNPPCETHETGTTNTATTTVV
ANLGGQPQPTQVQFVCDRQEAAASLVASTVGQQNGNVVRVCSNPPCETHETGTTHTRQLE
AHHTHTTNTPTTVRSTMGAGEPGEARGTPTPVYESSASGAVTVTALEPLLETHQTTSTGT
TMSVGVGTLLPVESGLEAAAPPAVAPQAVTSLLTPFPTQRVCSNPPCETHETGTTHTATT
VTSNMSSNQDPPPAASDQGDVESTQGDSVNITSSSAVTTAVSSTLTRAVTTVTQSTPVPG
PSVPKISSMTEATPGALTTEVPIPATITVTIANTETSDMPFSAVDILQPPEELQASPGPR
QQLPPRQLLQPASAPLMGESAEVLSASQTPELQAAVDLSGTGDPSSGQEPTSSAVVATVV
VQPPPPSQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQ
ALAIQAVLQAAQQAVMAGTGEPMDTSEAAAAVTQAELGHLAAEGQEGQATTIPIVLTQQE
LAALVQQQQQLQEAQXCPLTFSFLAGLAPSNTFVAPQPVVVASPAKLQAAATLTEVANGI
ESLGVKPDLPPPPSKVPAKKENQWFDVGVIKGTNVMVTHYFLPPDDAVPSDDDSGAVPDY
SQLKKQELQPGTAYKFRVAGVNACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHL
TWEPPSVTSGKIIEYSVYLAIQSSQAGGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLAS
VGLQEALLGCWRTDLDSRPEEEQVLASSYSPPPGPPLGINDSXVSKAALSQACGQAVRDE
SGQAAGPFGPPVSALEIRLQ
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atcgtggtgtttggcggcggcaacgaggggatagtggacgaactgcacgtgtacaacacg
gcgactaaccagtggttcatcccagccgtgagaggggacatcccccccgggtgtgcagcg
tatggcttcgtgtgtgacggcactcgcctgctggtgtttggtgggatggtggagtatggg
aaatacagcaacgacctctatgagctccaggcaagccggtgggaatggaagagactcaaa
gcaaagacgcccaaaaatggaccccctccgtgtcctcggctcgggcacagcttctccctt
gtgggcaacaaatgctacctgtttgggggtctggctaacgatagcgaggaccctaagaac
aacattcctaggtacctgaatgacttatacatcctggaattgcggcccggctctggagtg
gtggcctgggacatccccatcacttacggtgtcctgcctccaccccgggagtcccacact
gccgtggtctataccgagaaagacaacaagaagtccaagctggtgatctacggagggatg
agcggctgcaggctgggggacctctggaccttggatatcgatactctgacatggaataag
cccagtctcagcggggtggcgcctcttcctcggagtcttcactcagccacgaccatagga
aacaaaatgtacgtgtttggtggctgggtgcctctcgtcatggatgacgtcaaagtggcc
acacacgagaaggagtggaagtgtaccaacacactggcttgtctcaacctggggccactg
ggggttgtcggttcgcttgcccccctcgctcatctccgccccccaccgtccccagcaacc
nnntggcccctccccaccaccccccgcctctacatttggagtgggcgcgacggctatcga
aaggcctggaacaaccaggtctgctgcaaggacctgtggtacctggagacagaaaagcca
ccacccccggcccgggtacagctggtacgagccaacaccaattccctggaggtgagctgg
ggggccgtggcgacgccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccgcaccc
gctgtgcagccgctgacccaggtaggcatcacgctcctgccccaggctgctgccgcaccc
ccgaccaccactgccatccaggtcttgccgacggtacccggcagctcaatctccgtgccc
acggcggccaggactcaaggcgtccctgctgttctcaaagttactggtcctcaggctacg
acaggaaccccgctggtcaccatgcgacctgccagccaggctgggaaagcccctgtcacc
gtgacctcccttcctgcaggcgtgcgaatggtcgtgccgacacagagtgcccagggcacg
gtgattggcagcagcccgcagatgagtggcatggctgcactggcggctgcggctgccgcc
acccagaagattccaccctcgtcagcgcccaccgtgctgagtgtcccagcaggcaccacc
atcgtcaaaaccgtggccgtgacacccggcaccaccaccctcccggctactgtaaaggtg
gcctcctcgccggtcatggtgagcaacccggccactcggatgctgaaaactgcagccgcc
caggtggggacgtctgtctcctctgctgccaacacatccacccgtcccatcatcacggtg
cacaagtcagggactgtgacggtggcccagcaagcccaggtggtgaccacggtggtgggc
ggagtaaccaagaccattaccctggtgaagagccccatctctgtcccaggaggcagtgct
ctgatctccaacctgggcaaagtgatgtcagtggttcagaccaaaccagttcagacttca
gcagtcacaggccaggcatctacgggcccggtgactcagatcatccagaccaaagggccc
ctgccggctgggaccatcctgaagctggtcacctcagcggacggcaagcccaccaccatc
ataacgaccacacaggccagtggggccgggactaagcccaccatcctgggcatcagcagc
gtgtccccgagcaccaccaagccgggcacaaccaccatcatcaagaccatccccatgtcg
gccatcatcacgcaggccggcgccacaggtgtgagcagcagtccaggcatcaagtccccc
atcaccatcatcaccaccaaggtgatgacttcaggaaccggagcgcctgccaagatcatc
acagctgtccctaaaattgccactggccacgggcagcaaggagtgacccaggtggtgcta
aagggggcccccggacagccgggcaccatcctccgcaccgtgcccatggggggtgtccgc
ctggtcacccctgtcactgtctctgccgtcaagccagccgtcaccacgttggttgtgaag
ggcaccacaggcgtcacgactctcggcacagtgacaggcaccgtctccaccagccttgcg
ggagccgggggccacagtaccagcgcctccctggccacacccatcaccaccttgggcacc
atcgccactctctcaagccaagtgatcaaccccactgccatcaccgtgtcggctgcacag
accacgctgacggccgccagcgggctcaccacccccaccatcaccatgcagcctgtctcc
cagcccacccaggtgactctcatcacggcacccagtggagttgaggcccagcctgtgcat
gacctccctgtgtccattctggcctcgcctactacagaacagcccacggccacggtcacc
atcgctgattcaggtcagggtgaggtgcagccgggcactgtgacgctggtttgctccaac
ccaccctgtgagacccacgagacaggcaccaccaacacggccaccaccaccgtcgtggct
aacctcggggggcagccacagcccacccaagtgcagttcgtctgtgacagacaggaggcg
gctgcttctctcgtggcctcgacggtggggcagcagaacggcaacgtggttcgcgtctgc
tccaacccaccatgcgagacccacgagacgggcaccacgcacacgcgccagctggaggct
catcacacccacacgaccaatacccccaccacagtccgctccaccatgggtgccggggag
cccggtgaggcacggggcacccccacgcccgtgtacgagagctcagccagcggcgccgtg
actgtgacggccctggagccgctgctggaaacacaccagaccacatccaccggtaccacc
atgtctgtcggcgtgggtaccttgctgcccgtggagtccggcttggaggcggcggcaccg
cctgccgtcgcccctcaggctgtcacttcattgctgactcctttcccgacacaaagggtg
tgctccaaccctccctgtgagacccacgagacgggcaccacacacacagctaccaccgtc
acctcgaacatgagctcaaaccaagatcctcccccagccgccagtgaccagggagacgtg
gagagcacccagggcgacagcgtgaacatcaccagctccagtgccgttacgacagccgtg
tcctccacgctgacgcgggctgtgaccactgtgacacagtccaccccggtcccgggcccc
tcggtaccgaagatctcatcaatgactgaggctaccccaggggctctgaccaccgaagtc
cccatcccggccacgataacagtgaccatagccaacacagaaacttctgacatgcccttc
tctgctgttgacatcctgcagcccccagaggaactccaggcctcaccagggccccgccag
cagctcccgccgcggcagctcctgcagcctgcctccgcacccctgatgggggagtccgcc
gaggtcctgtcagcctcccagacccctgagctccaagccgccgtggatctgagcggtaca
ggggacccgtcttcgggccaggagcccaccagctccgccgtggtggccacggtggtggtc
cagccgcccccgccctcgcagtcggaagtagaccagctgtcgcttcctcaagagctgatg
gccgaggcccaggcaggcaccaccaccctcatggtgacggggctcacccccgaggagctg
gcggtcactgctgctgctgaagctgccgcccaggctgcagccaccgaggaggcccaggcc
ctggccatccaggcggtgctccaggctgcacagcaggccgtcatggcaggcaccggggaa
cccatggacacgtctgaggcggcggcggccgtgacgcaggccgagctgggccacctggca
gctgagggccaggagggccaggccaccaccatccccatcgtgctgacgcagcaggagctg
gccgcgctggtacagcagcagcagcagctgcaggaggcgcagncctgcccgctgacgttt
tctttcctcgcaggcctggctccatccaacacgtttgtggccccccagccggttgtggtc
gccagccccgcaaaactgcaggcggcggctaccctgaccgaagtggccaatggcattgag
tccctgggcgtgaagccagacttaccgcccccacccagcaaggttccagcaaagaaggag
aaccagtggtttgatgtgggcgtcattaagggcaccaacgtaatggtgacacactatttc
ctgccaccagacgatgctgtgccgtccgacgatgactcgggtgccgtccccgactacagc
cagctgaagaaacaggagctgcagccgggcaccgcctacaagttccgtgtcgctggggtc
aacgcctgtggccgggggccgttcagcgagatctcagccttcaagacgtgcctgcctggt
ttcccaggggccccctgcgccattaaaatcagcaaaagtccagatggtgctcacctcacc
tgggagccgccgtccgtaacctccggcaagatcatcgagtactctgtgtacctggccatc
cagagctcgcaggccggcggcgagccgaagagctccacccctgcacagctggccttcatg
cgggtgtactgcgggcccagcccgtcctgcctggtgcagtcctccagcctngcatctgtg
ggtttgcaggaagctctcctgggctgttggaggactgaccttgacagtcgcccggaggag
gaacaggtcctggcttcttcgtactctccgcccccaggtcccccgcttggcataaatgat
tcnnnggtgtccaaagcggcactgagccaggcttgcgggcaggctgtgcgggacgagtct
gggcaagcagccggtcccttcggaccccccgtctccgccctggagatacggctgcagtga
DBGET
integrated database retrieval system
