Crocuta crocuta (spotted hyena): 144236259
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Entry
144236259 CDS
T11532
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144236259 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccru03041
]
144236259 (PRPF4)
Spliceosome [BR:
ccru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
144236259 (PRPF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
PRP4
DSE1_N
Beta-prop_EML
ASA1
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_NOL10_N
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
144236259
NCBI-ProteinID:
XP_077626031
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcacgagcctcgtccacggcaaccaaaactaaggcacctgatgacttagtg
gcccccgtagtgaagaaaccacacatctattatggaagtttggaagagaaggagagggaa
cgtctggccaaaggagagtctgggattttgggaaaagaaggacttaaagctggaattgaa
gcaggaaatattaacataacctctggagaggtgtttgaaattgaagagcacatcagtgaa
cgacaggctgaagtattagccgaatttgagagaagaaagcgagcccggcagatcaatgtt
tccactgatgactcagaggtcaaggcttgccttagagccttgggggagcccatcacgctc
tttggagagggtccggctgaaagaagagaaaggttaagaaatatcctctcagtggttggt
actgatgccttaaaaaagaccaaaaaagatgatgagaaatctaagaagtccaaagaggag
tatcagcaaacctggtaccacgaaggaccaaacagcctgaaggtggctagactgtggatt
gctaattactcactgcccagggcaatgaaacgcttggaagaggcccgtcttcataaagag
attccagagacaacaaggacctcccagatgcaagagctgcacaaatctctccggtctttg
aataatttctgcagccaaattggggatgatcggcctatctcctactgccactttagtcct
aattccaaaatgctggccacagcttgttggagtgggctttgcaagctctggtctgttccc
gactgcagcctccttcacactctccgaggccataacacaaacgtaggagcaattgtattc
catccaaaatccactgtctccttggaccagaaagatgtcaatctggcctcttgtgctgct
gatgggtctgtgaagctttggagccttgacagtgacgaaccagtggcagatattgaaggc
catacagtacgtgtggcccgtgtaatgtggcatccatcaggacgttttttgggcaccacc
tgctatgaccgctcatggcgcttatgggatttagaggctcaagaggagatcctgcatcag
gaaggccacagcatgggcgtgtatgacatcgccttccatcaggatggctctttggctggc
actgggggactggatgcatttggtcgtgtttgggacctgcgcacaggacggtgtatcatg
ttcctagaaggccacctgaaggaaatctatggaataaatttctcccccaatggctaccac
attgcgaccggcagcggtgacaacacctgcaaagtgtgggaccttcggcagcggcgctgt
gtctataccatccctgcccatcagaacttagtgaccggtgtcaagtttgagcctatccat
ggaaatttcttgctcactggcgcttacgacaatacagccaagatctggacccacccaggc
tggtccccactgaagactctggccggccacgaaggcaaagtgatgggcctagacatttct
tccgatgggcagctcatagccacttgctcgtacgataggaccttcaagctctggatggct
gaatag
DBGET
integrated database retrieval system
