Crocuta crocuta (spotted hyena): 144239190
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Entry
144239190 CDS
T11532
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
144239190 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccru03019
]
144239190 (PARN)
Enzymes [BR:
ccru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
144239190 (PARN)
Messenger RNA biogenesis [BR:
ccru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
144239190 (PARN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
RRM_R3HCC1L
R3H
RRM_Thc1
T6PP_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
144239190
NCBI-ProteinID:
XP_077629318
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MEIIRSNFKSNLQKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRASPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSDGSGALAYVSPNASKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTAAEQLHEAGYDAYITGLCFIAMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYADYVGKKQEEKQIKRKWTEDSWKEVERKRLN
TQCIPYTLQNHYHHTNSLTATSTVGKRHLSPSPTEADLEARMSGEISDTELEQTESCAES
LSEGRKKAKKLKRMKKDLLPAGLYKILLKSWSYVLFNALETPICGEE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcaaaaagtgtaccaggccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagtgatggaccctcagtc
actgcgttaacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaaacat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgactacacagat
tcaaagtatataacaaagtcatttaacttctacgttttcccgaaacccttcaatagagcc
tcaccagatgtcaagtttgtttgtcagagctcaagcattgacttcctagcaagccaagga
tttgattttaataaagtttttcgcaatggaattccctatttaaatcaggaagaagaaagg
cagctgagagagcagtacgacgagaaacgcctgcagtccgacggttcgggcgccctggct
tatgtttcccccaacgcgtcaaagtgtcctgtgacgatccctgaggatcagaagaagttt
attgaccaagtggtagagaaaatagaagatttattacaaagtgaagaaaacaagaacttg
gatttagagccatgtactgggttccaaagaaaactaatttatcagactttgagctggaag
tatcccaaaggcattcacgttgagactttagaaaccgaaaagaaggagcgatacatcgtc
atcagcaaagtagatgaagaagaacgtaaaaggagagagcagcagaaacacgcgaaagaa
caggaagaactgaatgatgctgtgggattttctagagttattcatgccattgccaactcg
ggaaaactcgttattggacacaatatgctcttggatgtcatgcacacggttcatcagttc
tactgccctctgcctgcggacttaaatgagtttaaggagatgacaacatgtgttttcccc
agactcttggatacaaaattgatggccagcacacaaccatttaaggatatcattaacaac
acatctcttgcagaattggaaaagcggttaaaagagacacctttcaacccacctaaagtt
gaaagtgcagaaggttttccgagttacgacacggctgccgagcagctccacgaggcaggc
tatgatgcatatatcacggggctgtgcttcattgccatggccaactacctaggttctttt
cttagccctccaaaaattcacgtgtctgccagatcaaaactcattgaacctttttttaac
aagttatttcttatgagagtcatggatatcccctatctaaacttggaaggaccagacttg
caaccaaaacgcgatcatgttctccatgtgacattccccaaagaatggaaaaccagcgac
ctttaccagctttttagtgcctttgggaacattcagatatcctggatcgatgacacatca
gcgtttgtttctctcagccagcccgaacaagtacagattgccgtcaataccagcaaatat
gcagaaagctatcggattcaaacctacgctgactacgtggggaaaaaacaagaggaaaag
cagatcaagagaaagtggacagaagatagctggaaggaggtggagagaaagcggttaaac
acgcagtgcataccctacactctgcagaatcactatcaccacaccaatagtcttaccgcg
accagcacagtaggaaagagacatttgagccccagcccaacagaagctgacctggaggcc
agaatgtcgggcgagatttctgacactgagctcgagcagaccgagtcctgtgcagaatcc
ctctccgagggaaggaaaaaggccaagaaattaaaaaggatgaagaaggaccttttgcca
gcaggtttgtataagatcttactgaagtcctggagttatgttctctttaacgctctagaa
actcccatttgcggggaggaatga
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