Crocuta crocuta (spotted hyena): 144239807
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Entry
144239807 CDS
T11532
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
ccru Crocuta crocuta (spotted hyena)
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccru04040
]
144239807 (SCN11A)
Ion channels [BR:
ccru04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
144239807 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
144239807
NCBI-ProteinID:
XP_077630105
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MKMDDRCYPVIFPDERNFRPFTPDTLATIEKRIAAQKEKKKRKDQTPAEPLPRPQLDLKV
SRKLPKLYGNIPRELIARPLEDLDPFYRNHKTFMVLNKERTIYRFSAQRALFLFGPFNPV
RSLAIRISVHSVFSVFIIGAVVTNCVFMATACGKDGSSLYADSAEYVFTGIYIFEALIKI
LARGFVLDEFSFLRDPWNWLDSIVIATAFVSYFPSISTSGISLSSLRTFRVFRALKAISV
VSGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVAQQLFKGSLDQRCVRKECRGMDTLE
DYCFEKKDSAEFRMCGSWLGESACSEEFQCNHTRRNPDYGYTNFDNFGWSFLSMFRLMTQ
DSWERLYQQTLRTSGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKE
KMFQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGKRNRKSFFLRDSGKDQ
PSGSDSDEDATKKPHILEQTKRLSQNLSVDHHDEHGDPFQRQRALSAVSILTITMQEQEK
SQEPCLPCGGNLASRYLVWNCSPQWLCVKKTLRAVMTDPFTELLITVCIIINTVFLALEH
YKMDRSFELMLYTGNVVFTGIFMAEMCLKIIALDPYNYFRRGWNVFDSIVALLSFADVMN
SLVVGKQSPLFFHSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSV
VGMQLFGSKFNSVRNNTKSCGPAVPCLRRWHMGDVYRSFLVVFRILCGEWIENMWECMQE
TSKPLCIIVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGHLDGEAKKTKVQLALDRFHR
AFCLVLRTLEHFCHTRCRGQNLPQHKEVSGRPAAKSKDIIPLVTQMKKGSETWGDFGGLT
SAPKTLSVEHDRTWLAPLAEEEDDFEPSGENKALRAARPEAGKQAYELHPETKRSTSPGA
QSVEIDVFSEDDICLSVQNPRKKSDTTSVLSECSTIDPQDPFARAPEMVPKKEPERCFPR
GLGHCCPCCAVDKRKSPWIIWWNLRKTCYQIVKHSWFESFVIFVILLSSGALVFEDIHLE
KRPNIQALLNCTDHIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLK
SLKSFRTLRALRPLRALSQFEGMKVVVNALVGAIPAILNVLLVCLIFWLIFCILGVYFFS
GKFGRCVNRTDANSVINYSIVANQSQCEGGNFSWVTLPVNFDNVGMAYLALLQVATFKGW
MDIMYAAVDSRGKELQPGFEENPINYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKIS
GEDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTSQVFDIIIILLIFLN
MVSMMIESDNHPKDTKVFLERLNLAFVVVFTTECLIKIFALRQYYFTNGWNLFDCVIVVL
SIVSAMVSALEDQQHIPFPPTLFRVVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFN
IGLLLFLVMFIYAIFGMNCFCKVKEGFGIDDIFNFRTFVGSILCLFQITTSAGWDALLRP
MLQSNESCNPNLDSRHLPAIAITYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLG
EDDFEIFYEVWEKFDPEATQFIKYPALSDFADALPEPLRVAKPNRFQFLVMDLPMVSGDR
LHCLDILFAFTTRVLGDSSGLDSMKAMMEEKFMEANPSKKLYEPIVTTTKRKEEEKCAAI
IQKAFRKYKLKMSTCALEDGPRSPLQTLCNGDLSSSEVAEGKVHYD
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggatgacaggtgctacccggtgatctttccagatgagcggaatttccgaccc
ttcactcctgacaccctggctacgattgagaagcggatcgccgcccaaaaggagaagaag
aagcgcaaagaccagacaccagcagaacccttgcctcggcctcagcttgacctcaaggtc
tccaggaagttgcccaaactttatggcaacattccccgtgagctgatagcacggcccctg
gaagacttggacccattctacagaaatcataagaccttcatggtgctgaacaaagagagg
accatctaccgcttcagcgcccagcgcgccctgttcctctttgggcctttcaaccccgtc
cggagtctggccatcaggatctcggtccattccgtgttcagcgtgttcatcatcggcgcc
gtggtcaccaactgcgtgttcatggccaccgcgtgcgggaaggacggcagcagcctgtac
gccgacagcgccgagtatgtcttcactgggatttatatttttgaagctttgataaaaata
ttggcaagaggttttgttctggatgagttttcttttcttcgagatccatggaactggctg
gactccattgtcattgcaacagcgtttgtatcatacttcccgagcatcagcaccagcgga
atcagtctgtcgtccctgcgcaccttccgggtgttcagagctttgaaagcaatttcagtg
gtttcaggtttgaaggtcattgtcggggccttgctgcgctctgtgaagaagcttgttgac
gtgatgatcctgactctcttttgcctcagtatctttgccctggtagctcagcagctcttc
aagggaagcctggaccagagatgcgtcaggaaggagtgtaggggtatggacacccttgaa
gactattgctttgaaaagaaagactcggctgaattcagaatgtgcggcagctggctgggt
gaaagcgcctgttccgaagaatttcagtgcaaccacaccaggaggaaccctgactatggt
tataccaacttcgacaacttcggctggtctttcctgtccatgtttcggcttatgacccaa
gattcctgggagaggctttaccagcagaccttgcgcacctcggggctcttctcggtcttc
ttcttcgtggtggtcatcttcctgggctccttctacctgattaacctgaccctggctgtg
gtcaccatggcttacgaggagcagaacagaaacgttgctgccgagaccgaggccaaggag
aagatgttccaggaagcccagcggctgctgaaggaggagaaggaggctctggttgccatg
ggaattgacagaagttcacttaattccctggaggcatcatctttttccccaaagaagaga
aagctatttggtaagaggaaccggaagtccttttttttgagagactctgggaaagaccag
ccttcaggatcagattctgacgaagatgccacaaaaaagccacacatcctggagcaaacc
aaacggctgtcccagaacctgtccgtggatcaccatgacgaacacggggaccccttccaa
aggcagagggcgctgagcgctgtcagcatcctcaccatcaccatgcaggagcaagagaaa
tcacaggagccttgcctcccctgtggagggaacctggcgtccagatacctcgtgtggaac
tgcagcccccagtggctgtgcgttaagaagaccctgcgagccgtgatgaccgaccccttc
acggagctgctcatcaccgtctgcatcataatcaatactgtcttcctggccttggagcat
tacaaaatggaccgcagttttgagctcatgttgtatacagggaatgtggttttcactggc
attttcatggcagaaatgtgcctgaaaatcattgcgctcgacccctacaactacttccgc
cgaggctggaacgttttcgacagcatcgtggctcttctgagttttgcagatgtgatgaac
agtttagttgtaggaaagcagagtcctctatttttccattccttaagagtgctaagggtt
ttcaagttagccaaatcctggccaactttaaacacactgataaagataattggtcactcc
gtcggagccctgggaaacctgaccgtggtcctggccatcgtcgtcttcattttctcagta
gttggcatgcagctttttggctctaagttcaattctgtaaggaataatacaaagtcgtgt
ggccctgcagtgccgtgcttacgacgctggcacatgggggacgtgtaccgctcctttctg
gtggtgttccgcatcctctgtggggagtggatcgaaaacatgtgggagtgcatgcaagaa
accagcaagcctctgtgcatcatcgtctttctgttgatcatggtgataggaaaactcgtg
gtactcaacctcttcattgccttgctgctcaattccttcagtaacgaggagagggatgga
cacttggatggagaagccaagaaaaccaaagtccagttagccctggatcggttccaccgg
gctttttgccttgtattacgtacccttgagcatttttgtcacacgcggtgcaggggacag
aacttaccccagcacaaagaggtgtcggggcgccctgccgccaaaagcaaagacatcatt
ccgctggtcacacagatgaagaagggctcagagacctggggggactttggcggactgact
tctgcaccgaagaccttgagtgtggagcatgatcggacttggttggccccacttgcagag
gaagaggacgattttgaaccttctggtgaaaacaaggcactgcgtgccgcacggcctgag
gctggcaaacaggcctatgaactccatccggagaccaagaggtcaaccagcccaggggct
caaagtgtggaaattgatgtgttctctgaagatgacatctgtctgtccgtacagaatccc
cgaaagaagtcggacactaccagtgttctctcagaatgtagcaccattgacccacaggat
ccttttgcgagggcacctgaaatggttcccaaaaaagaaccagagagatgttttcccaga
ggcctgggtcactgctgcccatgctgtgccgtcgacaagagaaagtccccctggatcatt
tggtggaacctgcggaaaacctgctaccaaatagtgaaacacagttggtttgagagcttt
gttatctttgtgattctgctgagcagtggggcactggtatttgaagatattcaccttgag
aaacgacccaatatccaagcattacttaattgtactgaccatattttcacatacattttt
atcctggagatgggtctaaaatgggtagcctttggatttgggaagtatttcaccagtgtc
tggtgctggcttgatttcatcattgtgattgtctctgtgaccagtctcattgacttaaag
agcctgaagtccttcaggactctgcgagcgctgaggcccctgcgcgcattgtcccagttt
gaaggaatgaaggtggtcgtcaacgctctcgtaggcgccatacctgccattctgaatgtt
ttgcttgtctgcctcattttctggctcatattttgtatcctgggagtatacttcttttct
ggaaaatttggaagatgcgttaatagaacagatgcaaactcagttataaattacagcatt
gttgcaaaccaaagtcaatgtgaaggtggaaatttctcttgggtcaccctgccagtcaac
tttgacaatgtgggaatggcttaccttgccctgttgcaagtggcaacgtttaagggctgg
atggatattatgtacgcggccgtggattccagagggaaagaactacagccagggtttgag
gagaacccaataaactaccttttcttcgtggcttttatcatctttggttcattcttcact
ctgaatctcttcatcggtgttatcattgacaacttcaaccaacagcagaaaaagataagt
ggtgaagatatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaatta
ggatccaaaaaacctcaaaagcccattccaaggcctctgaataagtgccagggtctcgtg
tttgacctagtcacaagccaggtctttgacatcatcatcatcctcctcatcttcctcaac
atggtcagcatgatgattgagtctgataaccaccctaaggacacaaaagtcttccttgag
cgtctcaacctggcctttgtggtcgtcttcacaaccgagtgtctcatcaaaatctttgct
ttgaggcaatactacttcaccaatggctggaacttatttgattgtgtgatcgtcgttctc
tctattgttagtgcgatggtttctgccttggaggaccagcagcacattcccttccctccc
acgctcttccgagtggtgcgcttggcccggatcggccggatcctgagactcgttcgggcg
gcgcgaggaattcggacgctcctttttgctctgatgatgtcccttccctctctgttcaac
attggtcttctacttttcctcgttatgtttatttatgccatctttggtatgaactgtttt
tgcaaagtgaaggaagggtttggaattgatgacatattcaacttcagaacttttgttggc
agcatcctctgcctctttcagatcaccacgtccgcgggctgggatgccctcctcaggccc
atgctgcaatcaaatgagtcgtgtaaccccaacttagacagccgtcacctccctgccata
gccatcacctacttcgtcagctacatcatcatttcctttctcattgttgtcaacatgtac
attgctgtgatcttggagaacttcaatacggccacagaagaaagcgaggaccctttgggt
gaagatgactttgaaatattctatgaagtctgggaaaagtttgacccagaagcaacacag
tttatcaaatatcctgccctttctgactttgccgatgcccttcccgagcctttacgtgtg
gcaaagccaaatagatttcaatttctagtgatggacttgcccatggtgagtggagatcgc
ctccactgcctggacattctcttcgcattcactactcgggtgcttggtgactccagtggc
ctggacagcatgaaagcaatgatggaggagaagttcatggaggccaacccctccaagaag
ttatatgaacccatagtcaccaccaccaagaggaaagaagaggaaaaatgtgctgctatt
atccaaaaggcctttcgaaaatacaagctgaagatgtccacgtgtgctttagaagacggg
ccccgttcgccactgcagacgctctgcaatggggacctctccagctccgaggtggctgag
ggcaaagtccactacgactga
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