Crocuta crocuta (spotted hyena): 144242296
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Entry
144242296 CDS
T11532
Symbol
DDX6
Name
(RefSeq) putative ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
144242296 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccru03019
]
144242296 (DDX6)
03036 Chromosome and associated proteins [BR:
ccru03036
]
144242296 (DDX6)
Enzymes [BR:
ccru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
144242296 (DDX6)
Messenger RNA biogenesis [BR:
ccru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
144242296 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
144242296 (DDX6)
Chromosome and associated proteins [BR:
ccru03036
]
Eukaryotic type
Gene silencing
piRNA pathway
144242296 (DDX6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
144242296
NCBI-ProteinID:
XP_077633275
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctgtccagtcaaaatggtcag
ctgaggggccctgtgaagcccagtggtggccccggaggagggggcacacagacacagcaa
cagatgaaccagctgaaaaataccaacacaatcaataatggcactcagcagcaagcacag
agtatgaccaccactattaaacctggtgatgactggaaaaagactttaaaactccctcca
aaggatctaagaatcaaaacttcggatgtgacctccacaaaaggaaatgagtttgaagat
tactgtttgaaacgggagttactgatgggaatttttgaaatgggctgggaaaagccatct
cctattcaggaggagagcattcccattgctttatctggtagggatatcttagctagagca
aaaaatggaacaggcaagagcggtgcctacctcattcccttacttgaacggctagacctg
aagaaggacaatatacaagcaatggtgattgttcccactagagaacttgctctacaggtc
agtcaaatttgcatccaggtcagcaaacacatgggaggggccaaagtgatggcaaccaca
ggaggaaccaatttacgggatgacataatgaggcttgatgacacagtgcacgtggtgata
gctacccctggaagaatcctggatcttattaagaaaggagtagcaaaagttgatcatgtc
cagatgatagtattggatgaggcagataagttgctgtcacaggattttgtgcagataatg
gaggatattattctcacgctacctaaaaacagacagattttattatattcagctactttc
cctcttagtgtacagaaattcatgaattcccatttgcagaaaccctatgagattaacctg
atggaggaactaactttgaagggagtaacccagtactatgcttatgtaactgagcgccaa
aaagtacactgcctcaatacacttttctccaggcttcagataaaccagtcgatcattttc
tgtaactcctctcagcgagttgaattgctagccaagaagatttctcaactgggttattct
tgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtatttcatgatttc
cgaaatggcttatgccgcaatcttgtttgcactgatttgtttacccgaggtattgatata
caagctgtgaatgtggtaataaactttgacttcccaaagctggcagagacctatctccat
cgtattggaagatcaggtcgctttggtcatcttggcttagccatcaacttgatcacatat
gatgaccgcttcaacctgaaaagtattgaggagcagctgggaacagaaattaaaccgatc
ccaagcaacattgacaagagcctgtatgtggcagaataccacagcgagcccgtagaagat
gagaaaccttaa
DBGET
integrated database retrieval system
