KEGG   Crocuta crocuta (spotted hyena): 144243131
Entry
144243131         CDS       T11532                                 
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
ccru  Crocuta crocuta (spotted hyena)
Pathway
ccru03013  Nucleocytoplasmic transport
ccru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    144243131 (THOC1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    144243131 (THOC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccru03019]
    144243131 (THOC1)
   03041 Spliceosome [BR:ccru03041]
    144243131 (THOC1)
Messenger RNA biogenesis [BR:ccru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     144243131 (THOC1)
Spliceosome [BR:ccru03041]
 Complex C
  Other components
   EJC/TREX
    144243131 (THOC1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    144243131 (THOC1)
SSDB
Motif
Pfam: efThoc1 Death bDLD3
Other DBs
NCBI-GeneID: 144243131
NCBI-ProteinID: XP_077634336
LinkDB
Position
Unknown
AA seq 657 aa
MSPTPPLFSLPEARSRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKAGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVARKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLMNALNKSGLSDLAESLTNDNETNS
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggtcgcgatttacgaagtct
accagagaggccctgaacaacaaaaatatcaagccattgttgaataccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcactcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtactgcatctacaccttttgtattattgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatctactacgtatgtgc
aatgatctcctaagaagattatcaaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccctgggtcag
aagcatactgaggatagagaagaaggaatggatgttgaggaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
cttaagtattctgaagaagttctagctgtttttaagagttataaattagatgatactcag
gcctccaggaaaaagatggaagaattaaaagcaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagcgacagtaactttcgccgacac
atccttttgcaatatctcattttattccagtatctcaaggggcaggtcaaattcaaaagt
tcaaactatgtattaactgatgagcaatcactgtggattgaagatacgacaaaatcagtt
tatcaactactatctgaaaacccacctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcgtggaaaaatgaaggctgcccaagctttgtg
aaagaaagaacatcagacacgaagccaacaagagtagctcgcaagagaacggcaccagag
gacttcctagggaaaggacccaacaaaaagattctaatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataacatggaagcctgcaaatcagagacaagggaatacatg
ccaactttggaggaattctttgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaaatgaatacaaggctgtgaacaattcaaattatggttggagagccctgagactacta
gcacggagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgccagaa
tatcttgaaaacatggtaataaagctagcaaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgttcggcgagacaaacctgtgacaggggaacaaatagaagtatttgccaacaag
ctgggcgaacagtggaagatcctggctccctacttggaaatgaaagactcagaaattaga
cagattgagtgtgacagtgaagacatgaagatgagagctaagcagctactagtcgcctgg
caagatcaagagggagtacatgctacacctgagaatctgatgaatgcactgaataagtcc
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag

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