KEGG   Crocuta crocuta (spotted hyena): 144243465
Entry
144243465         CDS       T11532                                 
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
ccru  Crocuta crocuta (spotted hyena)
Pathway
ccru04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:ccru00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    144243465 (COL13A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ccru00536]
    144243465 (COL13A1)
Glycosaminoglycan binding proteins [BR:ccru00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   144243465 (COL13A1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 144243465
NCBI-ProteinID: XP_077634663
LinkDB
Position
Unknown
AA seq 567 aa
MSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGEMGLTGPRGQPGPQGQKGEKGQ
CGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGHPGLPG
PMGPPGLPGAPGPKGDPGIQGFHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGTPGA
KGEKGAAGSPGLLGLLGQKGEKGDAGNSFGGGRGDPGPPGLPGPPGPKGEAGVDGQAGPP
GRQGDKGEPGAAGEQGPAGPKGNKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQ
IGPPGAPGIQGQKGEIGLPGPPGLDGEKGPRGKPGDMGPPGPQGPPGKAGPAGMKGEDGH
KGSPGDKGEKGETGQAGPPGLDGPTGEKGEPGDQGRPGAPGLPGPIGLPGFTGEKGEPGE
KGDPGVEVPGPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGTP
GPIGVPGPAGPKGERGSKGDLGMTGPSGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDK
GDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgtccatcatcggtccccgtggcccccctggtcagccgggcactcgaggttttcctgga
tttccgggtcccatcgggctagatggcaaaccgggccaccccggacctaaaggggagatg
ggcctgacgggtccccgaggacagccgggaccccaaggacaaaaaggagaaaagggtcag
tgtggagagtacccacatcggctgctgcctctcctcaattcagtgcgactggctccaccc
ccagtcataaaaaggcggacctttcagggtgaacagggccaggccggtatccaaggccct
ccagggccaccagggccccctggaccgagcggacctctggggcacccaggactcccaggg
cctatggggccgcccggcttacctggggctccaggaccaaagggagacccaggaatccag
ggcttccatggccggaagggagaacgcggcatgccggggatgccgggcaaacacggagca
aagggggctcccggaatcgccgtggcagggatgaagggtgaaccagggaccccaggagcc
aagggcgaaaagggggctgcaggctcccccggactgctcggcctcctggggcagaaggga
gaaaaaggcgatgctggcaactcctttggaggaggaagaggggaccccggccccccaggg
cttcctgggcccccaggcccaaagggagaagctggtgttgatggccaggccggccccccc
ggacggcaaggagacaagggtgagcccggagcagctggcgaacagggcccggctggcccc
aagggcaacaagggggagccagggaaaggagagatggtggactacaatggaaacatcaac
gaggctctccaggagatccgaacactggccttgatggggccccctggccttcccgggcaa
atcggcccacccggagccccggggatccaaggccagaagggggagattggacttccaggc
cctccaggactcgatggggaaaagggacctcgaggcaaaccaggagacatgggccctcct
ggtccccaaggccccccaggaaaggctgggcctgcaggaatgaagggtgaagatggacac
aaggggagcccaggagacaagggggagaaaggggagacggggcaagcaggcccaccgggt
ctagatggcccaactggggagaaaggagaaccaggtgaccaagggagacccggagcacca
ggattgcctggcccgatcgggctcccgggatttacgggagagaaaggagagcccggggag
aagggagacccaggagtggaggttcctgggcctccagggccagaggggcctcccggacct
ccggggctccaaggcgttcctggaccaaagggggaagcaggactagacggagcaaaagga
gagaagggtgtccagggagagaaaggagaccgagggccgctgggattacccggtactcca
ggaccaatcggagttccgggcccagcgggaccaaagggtgagaggggcagcaaaggcgac
ctgggaatgacaggaccgtcaggagcggctgggcttcctggtttacacggaccacccggg
gacaaaggaaaccggggggagagggggaagaaaggctctagagggcctaaaggggataag
ggagaccaaggagcgcctggattagatgccccctgcccgttgggtgaagatggcttacca
gtccagggctgttggaacaagtga

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