Crocuta crocuta (spotted hyena): 144243465
Help
Entry
144243465 CDS
T11532
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
144243465 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccru00536
]
144243465 (COL13A1)
Glycosaminoglycan binding proteins [BR:
ccru00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
144243465 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
144243465
NCBI-ProteinID:
XP_077634663
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGEMGLTGPRGQPGPQGQKGEKGQ
CGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGHPGLPG
PMGPPGLPGAPGPKGDPGIQGFHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGTPGA
KGEKGAAGSPGLLGLLGQKGEKGDAGNSFGGGRGDPGPPGLPGPPGPKGEAGVDGQAGPP
GRQGDKGEPGAAGEQGPAGPKGNKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQ
IGPPGAPGIQGQKGEIGLPGPPGLDGEKGPRGKPGDMGPPGPQGPPGKAGPAGMKGEDGH
KGSPGDKGEKGETGQAGPPGLDGPTGEKGEPGDQGRPGAPGLPGPIGLPGFTGEKGEPGE
KGDPGVEVPGPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGTP
GPIGVPGPAGPKGERGSKGDLGMTGPSGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDK
GDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcatcggtccccgtggcccccctggtcagccgggcactcgaggttttcctgga
tttccgggtcccatcgggctagatggcaaaccgggccaccccggacctaaaggggagatg
ggcctgacgggtccccgaggacagccgggaccccaaggacaaaaaggagaaaagggtcag
tgtggagagtacccacatcggctgctgcctctcctcaattcagtgcgactggctccaccc
ccagtcataaaaaggcggacctttcagggtgaacagggccaggccggtatccaaggccct
ccagggccaccagggccccctggaccgagcggacctctggggcacccaggactcccaggg
cctatggggccgcccggcttacctggggctccaggaccaaagggagacccaggaatccag
ggcttccatggccggaagggagaacgcggcatgccggggatgccgggcaaacacggagca
aagggggctcccggaatcgccgtggcagggatgaagggtgaaccagggaccccaggagcc
aagggcgaaaagggggctgcaggctcccccggactgctcggcctcctggggcagaaggga
gaaaaaggcgatgctggcaactcctttggaggaggaagaggggaccccggccccccaggg
cttcctgggcccccaggcccaaagggagaagctggtgttgatggccaggccggccccccc
ggacggcaaggagacaagggtgagcccggagcagctggcgaacagggcccggctggcccc
aagggcaacaagggggagccagggaaaggagagatggtggactacaatggaaacatcaac
gaggctctccaggagatccgaacactggccttgatggggccccctggccttcccgggcaa
atcggcccacccggagccccggggatccaaggccagaagggggagattggacttccaggc
cctccaggactcgatggggaaaagggacctcgaggcaaaccaggagacatgggccctcct
ggtccccaaggccccccaggaaaggctgggcctgcaggaatgaagggtgaagatggacac
aaggggagcccaggagacaagggggagaaaggggagacggggcaagcaggcccaccgggt
ctagatggcccaactggggagaaaggagaaccaggtgaccaagggagacccggagcacca
ggattgcctggcccgatcgggctcccgggatttacgggagagaaaggagagcccggggag
aagggagacccaggagtggaggttcctgggcctccagggccagaggggcctcccggacct
ccggggctccaaggcgttcctggaccaaagggggaagcaggactagacggagcaaaagga
gagaagggtgtccagggagagaaaggagaccgagggccgctgggattacccggtactcca
ggaccaatcggagttccgggcccagcgggaccaaagggtgagaggggcagcaaaggcgac
ctgggaatgacaggaccgtcaggagcggctgggcttcctggtttacacggaccacccggg
gacaaaggaaaccggggggagagggggaagaaaggctctagagggcctaaaggggataag
ggagaccaaggagcgcctggattagatgccccctgcccgttgggtgaagatggcttacca
gtccagggctgttggaacaagtga
DBGET
integrated database retrieval system