Crocuta crocuta (spotted hyena): 144245045
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Entry
144245045 CDS
T11532
Symbol
SMARCD2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru03082
ATP-dependent chromatin remodeling
ccru04714
Thermogenesis
ccru05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
144245045 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
144245045 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
144245045 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccru03021
]
144245045 (SMARCD2)
03036 Chromosome and associated proteins [BR:
ccru03036
]
144245045 (SMARCD2)
Transcription machinery [BR:
ccru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
144245045 (SMARCD2)
Chromosome and associated proteins [BR:
ccru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
144245045 (SMARCD2)
PBAF complex
144245045 (SMARCD2)
GBAF(ncBAF) complex
144245045 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
144245045
NCBI-ProteinID:
XP_077636575
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MSGRVAGGFPLPPXXAAALGAPPPPAGSGMLPGPALRGPGPAGGVGGPGAAAFRPMGPAG
PAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTSAPLRPGMPPTMMDPFRKRMLVPQAQP
QMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKK
PLTQKRKLRIYISNTFSPSKAEGDNAGNAGTPGGTPAGDKVASWELRVEGKLLDDPSKQK
RKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDH
QPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCG
RLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLAS
TTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVI
GNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtgtcgcgggcgggttcccgctgcctcccnctgctgcggctctgggagcg
ccgcctccgccagcgggatccggcatgctgccgggaccggcgctcagagggccagggccg
gctggaggcgtggggggccctggggccgccgccttccgccccatgggccccgcgggcccc
gcggcgcagtaccagcggcctggtatgtcaccagggagtcggatgcccatggctggctta
caggtgggaccccctgccggctccccgtttggcacatctgctccacttcgacctggcatg
ccacccaccatgatggacccattccgaaaacgcatgctggtgccccaggcccagccccaa
atgccagcccagcgccgggggttaaagaggaggaagatggcagataaggttctacctcag
cgaattcgggagcttgtcccagagtctcaggcgtacatggatcttttggcttttgagcgg
aagctggaccagaccattgcccgaaagcggatggagatccaagaggccatcaaaaagcct
ctgacgcaaaaacgaaagctgcggatctatatttccaataccttcagtcccagcaaggca
gaaggtgataatgcaggaaatgcagggacgcccgggggaaccccagcaggggacaaggtg
gcctcctgggaactccgagtggagggaaaactgctggatgatcctagcaaacagaagagg
aagttttcttcattctttaagagcctcgtcattgagctggataaggaactgtatgggccc
gacaaccacctggtggagtggcaccggatgcccaccacccaggagactgatggcttccag
gtgaaacggcctggagacctcaacgtcaagtgcaccctcctgctcatgctggatcatcag
cctccccagtacaagttggacccccgactggcaaggctgctgggggtgcacacacagacc
agggcggccatcatgcaggccctgtggctttatatcaaacacaaccagctgcaggacggg
cacgagcgggagtacatcaattgcaaccgttacttccgccagatcttcagttgtggccga
cttcgtttctctgagattcccatgaagctggctgggttgctgcagcatccagatcccatt
gtcatcaaccatgtcattagtgtagatcctaatgaccagaagaaaacggcgtgttatgac
attgacgttgaggtagacgacccactcaaggcccagatgagcaattttctggcctctacc
accaatcaacaggagattgcttcccttgatgtcaagatccatgagaccattgagtccatc
aaccagctgaagacccagagggatttcatgctcagctttagcactgaccctcaggacttc
atccaggaatggctccgatcccagcgccgagacctgaagatcatcactgatgtgattgga
aatcccgaggaagagagacgagctgctttctaccaccagccctgggcccaggaagcagtg
gggaggcacatctttgccaaggtgcagcagcgaaggcaagaactggaacaggtgctggga
atccgcctgacctaa
DBGET
integrated database retrieval system
