KEGG   Crocuta crocuta (spotted hyena): 144245542
Entry
144245542         CDS       T11532                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ccru  Crocuta crocuta (spotted hyena)
Pathway
ccru03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    144245542 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccru03400]
    144245542 (TDP1)
DNA repair and recombination proteins [BR:ccru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     144245542 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 144245542
NCBI-ProteinID: XP_077637066
LinkDB
Position
Unknown
AA seq 607 aa
MSQEGNYGKWTISSSDESEEEKPKLDKPSTSSLPHAGQGAANEPRYTCSEARKAAHRRKI
SPVKFNTDAVSEVSPPKRQRSGSQEDLGWCLSSSDDELQPEPQQKQAKDVVVREERGISS
SKDHAAQRTRNPSPPAHPGLKEEEEEYETSGEGQDIWDMLDKGNPFRFYLTRVSGIKPKY
NSGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPQFRKKPILLVHGDKREAKAHL
HAQAKPYENISLCQAKLDIAFGTHHTKMMFLLYEEGLRVVIHTSNLIRADWHQKTQGIWL
SPLYPRVVHGSGESTTHFKADLISYLMAYNAPSLKEWIDVIHEHDLSETNVYLIGSTPGR
FQGSQKDNWGHFRLRKLLKEHASSVPKGESWPIVGQFSSIGSLGADESKWLCSEFKESLV
TQGKESRTPGKGAAPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHKWS
AETSGRSNAMPHIKTYMRLSPDFNQIVWFLVTSANLSKAAWGALEKNGAQLMIRSYELGV
LFLPSAFGLDSFEVKPKFFSGNKEPTSSFPVPYDLPPELYGSKDRPWIWNIPYTKAPDTH
GNMWVPS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggtaattatggaaagtggacaatatccagtagtgatgaaagtgaagaa
gaaaagccaaaactggacaagccctctacttcttccctccctcatgctgggcagggagca
gcaaatgagccaagatacacctgttctgaagctaggaaagctgcccatagaaggaaaata
tcacccgtgaaattcaacacagatgcagtttcagaagtttcacctcccaaaaggcagagg
agtggttcccaggaggacctaggttggtgtctctccagcagcgatgatgagctgcagcca
gaaccccagcagaagcaggcgaaggacgtggtggtcagagaggagagaggcatctcttct
tctaaagaccatgctgcccagagaacccgcaatcccagccctcctgcacaccccgggctc
aaggaggaggaagaggagtatgaaacctcaggggaaggccaagacatttgggacatgttg
gataaggggaaccccttccgattttacctcactagagtctcgggaattaagccaaagtat
aactctggagccctccacatcaaggatattttatctcctctatttggaacacttgtatct
tcagctcagtttaactactgctttgatgtggactggctcgtaaaacagtatccaccacag
ttcaggaagaaaccaatcctgcttgtgcatggagataaacgagaagctaaggctcactta
catgcccaggccaagccttatgaaaacatttccctctgccaggcaaagttggatattgca
tttggaacacaccacacgaagatgatgttcctgctgtatgaagaaggcctccgggtcgtc
atacacacctccaacctcatccgtgctgactggcaccagaagactcagggaatatggttg
agccccttatacccacgagttgtccatggatctggagaatcaacaacacattttaaagct
gatcttatcagttacttgatggcttataatgctccttctcttaaggagtggatagatgtt
atccacgagcatgatctctctgaaaccaatgtttatcttattggatcgaccccaggacgc
tttcaaggaagtcagaaagataattggggacattttaggcttaggaagcttctgaaagag
catgcctcgtccgtacctaaaggagagtcttggccgatagtaggtcagttttcaagtatt
ggctctttgggagctgacgagtcaaaatggttgtgctcggagtttaaagaaagcttggtg
acccaggggaaggaaagcaggaccccagggaaaggtgctgctccacttcatctgatctat
ccttctgtggaaaacgtgcggaccagcttggaaggctatcccgctggcggctctcttccc
tatagcattcagacagctgaaaaacagaattggctccattcctattttcacaaatggtcg
gctgagacatctggccgcagcaatgctatgccacatattaaaacctatatgagactctct
ccagacttcaatcagattgtctggttccttgtcacaagtgcgaatctgtccaaggctgcc
tggggagcattagagaagaacggtgcccagctgatgatccgttcctatgagcttggggtc
cttttcctgccatctgcatttggcctggacagtttcgaagtgaaaccgaaattcttctca
gggaacaaggagccaacatcgtcgtttcctgtgccgtacgatcttcctccagagctgtat
ggaagtaaagatcggccatggatttggaatattccttacaccaaagcaccagacacacat
gggaatatgtgggttccctcctga

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