Crocuta crocuta (spotted hyena): 144245578
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Entry
144245578 CDS
T11532
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ccru Crocuta crocuta (spotted hyena)
Pathway
ccru05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ccru00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
144245578 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccru03036
]
144245578 (DICER1)
Chromosome and associated proteins [BR:
ccru03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
144245578 (DICER1)
microRNA pathway
RISC loading complex
144245578 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
144245578
NCBI-ProteinID:
XP_077637099
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MNESPALRPLSMAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHN
TIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNEKRTVFLVNSANQVAQQVSAVRTHSDL
KVGEYSHLEVNASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHL
AILDHPYREIMKLCEDCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATD
LVVLDRYTSQPCEIVVDCGPFTDRSGLYGRLLLELEEALSFINDCNISAHSKERDSTLIS
KQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALC
EEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDD
EDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFI
TGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDL
PTEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGET
DIEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELP
DGTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKET
VKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTT
PLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLP
LQMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMED
IEKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSK
FPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEK
RKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAG
VGVCSLPVDFRYPNLDFGWKKSIDSKSFISIANSSSAENDNYCKHSTIVVPENAARQGAT
RTSSLENHDQMSVNCRTLFGEPPGKRHFEASTDLTARNGVSHNKNLANGSCDLANGVCCQ
GSQPSYYKQEVPVQPTTSYPIQNLYSYENQPKPSDECTLLSNKYLDGNANTSTSDGSPAA
APTPGTREAAPAARDGRASVPSPGPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEML
GDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPV
NWLPPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLGQGLDDDDDDEDLMWKAPKDDADYE
DDFLEYDQEHIKFIDNMLMGSGAFVKKISLSPFATTVSAYEWKMPKKSSLGSGPFSSDFE
DFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSI
ADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPGTKRTDREGAAGPARETSGSQQKALSG
GRAAAAGSRSSLSKDLEYGCLKIPPRCMFDHPDADKTLSHLISGFENFEKKINYRFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPN
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaagccctgctttgcggccgctcagcatggccggcctgcagctcgtgacccct
gcctcctcgccaatgggccctttctttggactgccatggcaacaagaagcaatccatgat
aacatttatacgccaagaaaatatcaggtggaactgcttgaagcggctctggatcataat
accatagtctgcttgaacactggctcagggaagacgtttatcgccgtgctgctcactaaa
gagctgtcctatcagatccggggggacttcaacagaaatgagaaaaggacggtgttcttg
gtcaactctgcaaaccaggtcgctcaacaagtgtcagctgtgagaactcattcagatctc
aaggttggggaatactcacacctagaagtgaatgcatcttggacaaaagagaaatggaac
caagaatttactaagcaccaggttctcgttatgacttgctatgtcgccttgaatgttttg
aaaaatggctacttatcgctgtcagacattaacctcttggtgtttgatgagtgtcatctt
gcaatcttagaccacccctaccgagaaattatgaagctctgcgaagattgtccatcgtgt
cctcgtattttgggactgactgcttccattttaaatgggaaatgtgatcccgaggaattg
gaagaaaagattcagaagctggagaaaatcctcaagagtaatgctgagactgccactgac
ctggtggtattggacagatacacgtctcaaccgtgtgagattgtggtggactgtgggccg
ttcacggacagaagtggcctctatggccgactgctgctggagctggaggaagcactcagc
tttatcaacgactgcaacatatctgcgcattcgaaagagagagattcgactttgatttct
aaacagatactgtcagactgccgtgccgtgttggtggtcctgggcccctggtgcgcagac
aaggtcgctgggatgatggtccgggagctgcagaagtacatcaagcacgagcaggaggag
ctgcacaggaagtttctattgtttacagacaccttcctacggaaaatccacgcactgtgt
gaagagcacttctctcctgcctcccttgatctgaaattcgtgactcctaaagtaatcaaa
ctgctcgagatcttacgcaagtacaaaccatatgagcggcagcagttcgagagtgtcgag
tggtataacaacaggaatcaggataattatgtgtcttggagtgattccgaggacgatgat
gaggatgaagaaatcgaagagaaggagaaaccagagaccaactttccatctccgttcacc
aacatcttatgtgggatcattttcgtggaaagaagatacacagcagttgtcttaaacaga
ttgataaaggaagctggcaaacaggatccagagctggcttacatcagcagcaattttata
actggacatggcattggaaagaatcagcctcgtaacaaacagatggaagcagaattcaga
aaacaggaagaggtacttaggaaatttcgagcacatgagaccaacctgcttattgcaaca
agtattgtggaagagggtgttgacataccaaagtgcaacttggtggttcgttttgattta
cccacagagtatcgatcctatgttcaatctaagggaagggcaagggcaccgatctctaat
tacataatgttagcggatacagacaaaataaaaagttttgaagaagaccttaaaacatac
aaagctattgaaaagatcttgagaaacaagtgttccaagtccgtggatacgggggagact
gacattgagcctgttgtggatgacgacgatgtgttcccaccatatgtgttgcggcccgac
gatggtggtccccgagtcacgatcaacacggccattggacacatcaatagatactgtgct
agattaccaagtgatccgtttactcatctagctcctaaatgtagaactcgagagctgcct
gatggtacattttattcaactctttatctgccaattaactcacctcttcgagcctccatt
gttggtccaccaatgagctgtatacgattggcggagagagttgtcgctctcatttgctgt
gaaaaactgcacaaaattggcgaactggatgaccatttgatgccagttgggaaagagaca
gttaaatatgaagaagagcttgatttacacgacgaagaagagaccagtgttccgggaaga
ccaggttccaccaaacgaaggcagtgctaccccaaagcaattccagaatgtctgagggat
agctatcccagacccgatcagccctgttacctgtatgtgataggaatggttctgacgacg
cccttacctgatgagctcaacttcagaaggcggaagctgtatccccctgaggacaccaca
agatgctttggaatcctgacggccaagcccatccctcagatcccgcactttcctgtgtac
acgcgctctggagaggtcaccatatccattgagttgaagaagtcaggtttcacgttgcct
cttcaaatgcttgagttgattacaagacttcaccagtacatattctcacatattcttcgg
cttgaaaaacctgcactagaatttaaacccacagacgctgattcagcctactgtgttcta
cctcttaacgttgtgaatgactccagcactttggacattgacttcaaattcatggaagat
attgagaagtctgaggctcgcataggcattcccagcaccaagtattcaaaagaaacaccc
tttgtttttaaattagaagattaccaggacgccgttatcattccgagataccgcaatttt
gatcagcctcatcgattttatgtagctgatgtatacactgaccttaccccactgagtaaa
ttcccttccccggagtatgaaacttttgcagaatattataaaacaaagtataaccttgac
ctgaccaatctcaaccagccattgctggatgtggaccacacatcttcgagacttaatctt
ttgacgcctcgccatttgaatcagaaggggaaagcccttcctctaagcagcgctgagaag
agaaaagccaagtgggaaagtctgcaaaataaacagatactggttccggagctctgtgcg
atacacccgattccagcatcgctgtggagaaaagcggtctgtctccctagcatactctac
cgccttcactgccttctgaccgcagaggagctcagggcccagacggccagcgacgctggc
gtaggcgtctgctcgcttcccgtggattttaggtaccctaacctagacttcgggtggaag
aaatctatcgacagcaaatctttcatctcaattgcgaactcctcttcagctgaaaacgat
aattactgtaagcacagcacaattgtagtccctgaaaatgctgcacgtcaaggtgctact
agaacctcctctttagagaatcacgaccaaatgtctgtgaactgcagaacgctcttcggc
gagccgcccgggaagcgccacttcgaggcttcgacggatctcacagcgcggaacggtgtc
tctcacaataaaaaccttgccaatggcagttgcgacctagctaatggagtgtgttgccaa
ggaagtcagccgagttactacaagcaggaagtccctgtacaaccaactacctcatatccc
attcagaatctatacagttacgagaaccagcccaagcccagcgatgaatgtactctcctg
agtaataaataccttgatggaaacgctaacacatctacctcagatggaagtcccgcagcg
gccccgacgcccggtactcgcgaagctgcccccgcggcccgggacgggcgggcctctgtg
ccgagccctggtcccggctactcctcgaggactctgggcccgaatcccggacttattctg
caggctctgaccctctccaatgccagcgatgggtttaacctggagcggcttgaaatgctc
ggtgactccttcctgaagcacgccatcaccacctatctcttttgcacttaccccgacgct
cacgagggccgcctctcctacatgagaagcaaaaaggtcagcaactgtaatctgtaccgg
cttggaaaaaagaagggactgcccagccgcatggtggtgtcaatatttgatccccctgtg
aattggcttcctcccggttatgtagtaaaccaagacaaaagtaacacagataaatgggaa
aaagatgaaatgacaaaggactgcatgctggctaatggcaagctgggccaggggctggac
gacgacgacgacgacgaggatctgatgtggaaggctccgaaggacgacgccgattacgaa
gacgacttcctggagtacgatcaggaacacatcaagttcatagacaacatgttaatggga
tccggggcgttcgtcaagaagatctctctgtctccgttcgccaccaccgtgtctgcgtac
gagtggaaaatgcccaaaaagtcctccttgggaagtgggccgttctcctcagatttcgag
gacttcgactatagctcctgggatgccatgtgctacctggatcccagcaaggccgttgag
gaggacgacttcgtggtggggttctggaatccgtcggaagagaactgcggcgtcgacacc
gggaagcagtccatctcgtacgacctgcacacggagcagtgcatcgcggacaagagcatc
gccgactgcgtggaggccttgctgggctgctacctaaccagctgcggggagagggccgcc
cagctcttcctgtgctccttggggctgaaggtgctcccgggaacgaaaaggactgaccgg
gaaggggccgcgggccctgccagggagacttcaggcagccaacaaaaggccctttcaggg
ggccgggccgcggcggccggctcgcgctcctcgctgtcgaaagacctggagtacggctgt
ctgaagattcccccgaggtgtatgttcgatcatccagacgcagacaaaacgctgagtcac
ctgatatcgggtttcgagaacttcgaaaagaagatcaactacaggttcaagaataaggct
taccttctgcaggccttcacgcacgcctcctaccactacaataccatcacggattgttac
cagcgcctggagttcctgggagatgcgattttggactacctcataaccaagcacctttac
gaagacccgcggcagcactccccgggcgtcctgaccgacctgcggtccgcgctggtcaac
aacaccatcttcgcatcgctggcggtcaagtacgactaccacaagtacttcaaagccgtc
tcccccgagctcttccacgtcatcgacgacttcgtgcagttccagctggagaagaacgag
atgcagggcatggactcggagctcaggaggtctgaggaggatgaagagaaggaagaggat
atcgaagtcccgaaggccatgggggacattttcgagtcacttgctggtgccatttacatg
gacagcgggatgtccctggagacggtctggcaggtgtactatcccatgatgcggccgctg
atagaaaaattttctgcgaatgtgccccgttcccctgtgcgagaattgcttgaaatggaa
ccagaaactgccaaatttagcccggctgagaggacttacgacggcaaggtcagagtcacg
gtggaagtggtagggaaggggaagtttaagggcgtcggccgaagctaccggatcgccaaa
tcggcagcagcaagaagagcccttcgcagcctcaaggccaatcaacctcaggttcccaac
agctga
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integrated database retrieval system
