Caulobacter vibrioides NA1000: CCNA_00005
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Entry
CCNA_00005 CDS
T00841
Symbol
dnaQ
Name
(RefSeq) DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccs
Caulobacter vibrioides NA1000
Pathway
ccs03030
DNA replication
ccs03430
Mismatch repair
ccs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCNA_00005 (dnaQ)
03430 Mismatch repair
CCNA_00005 (dnaQ)
03440 Homologous recombination
CCNA_00005 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccs03032
]
CCNA_00005 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ccs03400
]
CCNA_00005 (dnaQ)
Enzymes [BR:
ccs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCNA_00005 (dnaQ)
DNA replication proteins [BR:
ccs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCNA_00005 (dnaQ)
DNA repair and recombination proteins [BR:
ccs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCNA_00005 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNApol_Exo
Motif
Other DBs
NCBI-GeneID:
7333146
NCBI-ProteinID:
YP_002515380
UniProt:
A0A0H3C3K6
LinkDB
All DBs
Position
3190..3903
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AA seq
237 aa
AA seq
DB search
MAREIILDTETTGFDPKTGDRLVEIGCIEVVDFMPTGRSFHEYCDPLRDMPAEAEKVHGL
SSAFLTGKPKFHEIADRFLDFVGDSVVVAHNAAFDRQFVNFELEKCGKAPIHEERWVDTL
AMAKKRFPGMYNSLDALCKRFKISLESRDKHGALIDAHLLAEVYLELQGGKERALELTHS
TGAMAVSTAIQGVYAARSRPLAPRSTDAEREIHAAWVRKNLKDKALWIQFGVVAAEA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgagatcatcctcgataccgaaaccaccggctttgacccaaagaccggtgac
cgcctggtcgaaatcggctgcatcgaagtggtcgatttcatgccgaccggccgctcgttc
cacgagtactgcgacccgctgcgcgacatgcccgccgaggctgagaaggttcatggcctg
tccagcgccttcctgaccggcaagccgaaattccacgagatcgccgatcgcttcctggat
tttgtcggcgacagcgtcgtggtggcccacaacgccgccttcgaccgtcagttcgtcaat
ttcgagctggagaaatgcggcaaggccccgatccacgaggagcgctgggtcgacacgctg
gccatggccaagaagcgcttcccgggcatgtacaactcgctcgacgcgctctgtaagcgg
ttcaagatcagcctggagagccgcgacaagcacggcgccctgatcgacgcccacctgctg
gccgaggtctatctggaactgcagggcggcaaggaacgcgcccttgaactgacccattcg
acaggggccatggcggtctccaccgcgatccagggcgtctatgccgcacggtcacgtccc
ctggcgccgcgctccacggacgccgagcgcgagatccacgccgcctgggttcgcaagaac
ctcaaggacaaggcgctctggatccagttcggcgtggtcgctgccgaagcctag
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