Caulobacter vibrioides NA1000: CCNA_00033
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Entry
CCNA_00033 CDS
T00841
Name
(RefSeq) polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccs
Caulobacter vibrioides NA1000
Pathway
ccs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCNA_00033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccs03019
]
CCNA_00033
03016 Transfer RNA biogenesis [BR:
ccs03016
]
CCNA_00033
Enzymes [BR:
ccs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CCNA_00033
Messenger RNA biogenesis [BR:
ccs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCNA_00033
Transfer RNA biogenesis [BR:
ccs03016
]
Prokaryotic type
tRNA degradation factors
CCNA_00033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
7332123
NCBI-ProteinID:
YP_002515408
UniProt:
B8GWZ0
LinkDB
All DBs
Position
complement(35824..37962)
Genome browser
AA seq
712 aa
AA seq
DB search
MFDIKRKTIEWGGKTLVLETGRIARQADGAVLATMGETVVLATAVFAKSQKPGQDFFPLT
VNYQEKTFAAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVVTVLQH
DLENDPDILGMVAASAALCLSGAPFMGPIGAARVGWVDGAYVLNPTLDEMKESKMDLVVA
GTADAVMMVESEIQELSEEIVLGGVNFAHQQMQAVIDAIIDLAEHAAKEPFAFEPEDTDA
IKAKMKDLVGADIAAAYKIQKKQDRYEAVGAAKKKAIAALGLSDENPTGYDPLKLGAIFK
ELEADVVRRGILDTGLRIDGRDVKTVRPILGEVGILPRTHGSALFTRGETQAIVVATLGT
GDDEQFIDALEGTYKESFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRALRPMLPTK
EDFPYTIRLVSEITESNGSSSMATVCGSSLAMMDAGVPLVRPVSGIAMGLILEQDGFAVL
SDILGDEDHLGDMDFKVAGTSEGLTSLQMDIKIAGITPAIMEQALAQAKEGRAHILGEMN
KAMDAPRADVGDFAPKIETINIPTDKIREVIGSGGKVIREIVATTGAKVDINDDGVVKVS
ASDGAKIKAAIDWIKSITDEAEVGKIYDGKVVKVVDFGAFVNFFGAKDGLVHVSQISNER
VAKPSDVLKEGQMVKVKLLGFDDRGKTKLSMKVVDQETGEDLSKKEAAAEEA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaaacgcaagacgatcgagtggggcggcaagacgctggtcctcgaaacc
ggtcgcatcgcccgtcaagccgacggcgccgtcctggccaccatgggcgaaaccgtcgtc
ctggccaccgccgtgttcgccaagagccagaagccgggccaagacttcttcccgctgacg
gtcaactatcaggaaaagaccttcgcggccggcaagatccccggcggcttcttcaagcgc
gaaggccgtccgtcggaaaaggagaccctggtctctcgcctgatcgaccgtccgatccgc
ccgctgttcgtcaagggcttcaagaacgaagtccaggtcgtcgtcaccgtgctgcagcac
gacctcgagaacgatccggatatcctgggcatggtcgccgcctcggccgccctgtgcctg
tcgggcgccccgttcatgggccccatcggcgcggctcgcgtgggctgggtcgacggcgcc
tacgtgctgaacccgactctcgacgagatgaaggaaagcaagatggacctcgtcgtggcc
ggcaccgccgacgccgtgatgatggttgaatcggaaatccaggagctctcggaagagatc
gtgctgggcggcgtcaacttcgcccaccagcagatgcaggccgtgatcgacgcgatcatc
gacctggccgagcacgccgccaaggagcccttcgcgttcgagccggaagacaccgacgcg
atcaaggccaagatgaaggacctagtgggtgccgacatcgccgccgcctacaagatccag
aagaagcaggaccgctatgaagcggtcggcgccgccaagaagaaggccatcgcggccctg
ggcctctcggacgaaaacccgaccggctacgacccgctgaagctgggcgcgatcttcaag
gaactggaagccgacgtcgtgcgtcgcggcatcctggacaccggcctgcgcatcgacggc
cgtgacgtgaagaccgtccgtccgatcctgggcgaagtcggcatcctgccgcgcacccac
ggctcggccctgttcacccgcggcgagacccaggcgatcgtggtcgccaccctgggcacc
ggcgacgacgagcagttcatcgacgccctggaaggcacctacaaggaatccttcctgctg
cactacaacttcccgccctactcggtcggtgagacgggccgcatgggctcgccgggccgt
cgcgaaatcggccacggcaagctggcctggcgcgccctgcgcccgatgctgccgaccaag
gaagacttcccctacacgatccgcctggtctcggagatcaccgagagcaacggttcgtcc
tcgatggccacggtctgcggttcgtcgctggccatgatggacgccggcgtgccgctggtc
cgtccggtctcgggcatcgccatgggcctgatcctggaacaggacggctttgcggttctg
tcggacatcctgggtgacgaagatcacctcggcgacatggacttcaaggtcgccggcacc
agcgagggcctgacttcgctgcagatggacatcaagatcgccggcatcacgcccgcgatc
atggagcaggctctggcccaggccaaggaaggccgcgcgcacatcctgggcgaaatgaac
aaggccatggacgcgccgcgcgccgacgtgggcgacttcgcgccgaagatcgagaccatc
aacatcccgaccgacaagatccgtgaagtgatcggttcgggcggcaaggtgatccgcgag
atcgtcgccaccaccggcgccaaggtcgacatcaacgacgacggcgtggtcaaggtctcg
gcctcggacggcgccaagatcaaggccgcgatcgactggatcaagtcgatcaccgacgaa
gccgaagtcggcaagatctatgacggcaaggtcgtgaaggtcgtcgatttcggcgccttc
gtgaacttcttcggcgccaaggacggcctcgtccacgtcagccagatcagcaacgaacgc
gtcgccaagccgtcggacgtgctgaaggaaggccagatggtcaaggtcaagctcctgggc
ttcgacgaccgcggcaagaccaagctgtcgatgaaggtcgtcgaccaggaaaccggcgaa
gacctgagcaagaaggaagcggcggccgaagaggcgtaa
DBGET
integrated database retrieval system
