Caulobacter vibrioides NA1000: CCNA_00035
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Entry
CCNA_00035 CDS
T00841
Name
(RefSeq) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccs
Caulobacter vibrioides NA1000
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccs03016
]
CCNA_00035
Enzymes [BR:
ccs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CCNA_00035
Transfer RNA biogenesis [BR:
ccs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCNA_00035
Prokaryotic type
CCNA_00035
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PHA_gran_rgn
Motif
Other DBs
NCBI-GeneID:
7332125
NCBI-ProteinID:
YP_002515410
UniProt:
A0A0H3C5T2
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All DBs
Position
complement(38495..39427)
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AA seq
310 aa
AA seq
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MARRKKGDAVSGWLCLDKPYDLTSTTAVSRVRRAFNAQKGGHAGTLDPLATGILPIALGE
ATKTVPFLMDADKAYRFTIAWGRDTTTLDREGETTGTSDVRPTREQVEAALPAFIGEVDQ
IPPNFSAIKVDGERAYDLARDGVEFELPTRKVSIFDLKVVDQPDADHVTLTMECGKGTYV
RAVVRDLAKALGTCGHVADLRRTRVGGFSEASAIALETLENLSYEARLSEALLPVETALD
DIPALAVTDEDAFRLAQGRAIVLLPRQVETLKAELPPGDRTVSAMSGDRLVALCEMRAGK
LNPVRVFQLT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcaagaagggcgacgccgtctcgggctggctgtgcctggacaagccctat
gacctgacctcgaccacggccgtctcccgcgtgcgccgcgcgttcaacgcccagaagggc
ggccacgccggcacgcttgatccactggccacgggcatcctgccgatcgcgctgggcgaa
gcgaccaaaaccgttccgttcctgatggacgccgacaaggcctatcgcttcaccatcgcc
tggggccgcgacacaacgacgctggaccgcgagggcgagaccacggggacctctgacgtg
cgccccacccgagagcaagtcgaggcggcgctgcccgccttcatcggcgaggtggatcag
attccgccgaacttctcggccatcaaggtcgacggcgagcgggcctatgacctggcgcgc
gacggcgtggagttcgagctgccgacccgcaaggtcagcattttcgacctcaaggtggtc
gaccagccggacgccgaccatgtgacgctcacgatggaatgcggcaagggcacctatgtc
cgcgccgtggtccgggacctggccaaggcgctgggaacctgcggtcacgtggccgacctg
cgccgcacccgggtgggcggcttctccgaggcctcggcgatagcgctggaaactctggag
aatttgagctatgaggcccggctgtcggaggcattgcttccggtcgagaccgcgctggac
gacatcccggcgttggccgtgaccgatgaagacgccttccggcttgcacagggacgcgcc
atcgtcctgcttccgcgtcaggtggaaacgttgaaagccgagcttccgcccggcgatcgc
accgtttcagccatgtccggcgacaggttggtggccctgtgcgagatgcgcgctgggaag
ctcaatcccgtgcgggtcttccaactcacctga
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