Caulobacter vibrioides NA1000: CCNA_01621
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Entry
CCNA_01621 CDS
T00841
Name
(RefSeq) DNA-directed RNA polymerase omega chain
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ccs
Caulobacter vibrioides NA1000
Pathway
ccs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCNA_01621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccs03021
]
CCNA_01621
03400 DNA repair and recombination proteins [BR:
ccs03400
]
CCNA_01621
Enzymes [BR:
ccs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCNA_01621
Transcription machinery [BR:
ccs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCNA_01621
DNA repair and recombination proteins [BR:
ccs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCNA_01621
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF7976
DUF4865
Motif
Other DBs
NCBI-GeneID:
7331599
NCBI-ProteinID:
YP_002516994
UniProt:
B8H618
Structure
PDB
PDBj
LinkDB
All DBs
Position
1741687..1742046
Genome browser
AA seq
119 aa
AA seq
DB search
MARVTVEDCVEKVPNRFALVLLSAHRARGISAGAALMVDRDNDKNPVVALREIADDVIDH
EGLKEHLISTLQRVDEHTEAEEEAETLALLADPSHMQMSELELVRALQSDRDGGQEERY
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcaccgtcgaagattgcgtcgagaaggttccgaaccgcttcgcgctcgtt
ctgctctcggcccaccgcgctcgcggcatttccgccggcgccgcgctgatggtcgaccgc
gataacgacaagaacccggttgtcgctctgcgcgagatcgccgacgacgtgatcgaccac
gaaggccttaaggaacacctcatcagcacgctgcagcgcgttgacgagcacaccgaggcc
gaggaagaggccgaaaccctggccctgctggccgatcccagccacatgcagatgagcgaa
ctggaactggtccgcgcgctgcaaagcgaccgagacggtggtcaggaggagcggtactga
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