Entry |
|
Symbol |
spoT
|
Name |
(RefSeq) Rsh ppGpp hydrolase-synthetase
|
KO |
|
Organism |
ccs Caulobacter vibrioides NA1000
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ccs00001]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CCNA_01622 (spoT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:ccs03009]
CCNA_01622 (spoT)
Enzymes [BR:ccs01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
CCNA_01622 (spoT)
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
CCNA_01622 (spoT)
Ribosome biogenesis [BR:ccs03009]
Prokaryotic type
Other maturation factors
CCNA_01622 (spoT)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1742148..1744376
|
AA seq |
742 aa
MSSVAPVAVTEAPAKPRPKFLRQYELIERVHAYDPTADEALLNRAYVYAMRMHGSQTRAS
GDPYYAHPIEVAGILTEYRLDTATIVTALLHDVIEDTPVTKEEIAKLFGEEIGELVEGVT
KLSKLELQAEHMRQAENLRKFILAISKDVRVLLVKLADRLHNMRTLHFIKNQAKRERIAR
ETRDIYAPLARNIGCHRICTELEELSFQHTNPVARDAIIRRLDVLREEQGGAVTLVSQEI
AARLESASLPARVFGREKSPYSIWRKLQRKSIGFSQMSDIYAFRVIVDSEEDCYRALGVV
HRAWSSVPDRFKDYISTPKRNNYRSLHTTVVGPRGMRIEMQIRTESMDRVNEEGVAAHFR
YKDASYGLDLEGMEAAGGRDPLANLRQLVQVLEHGGDSEELVEHAKLEMFLDQVFVFTPK
GKLVSLPRGAMPLDFAYAVHTSVGDTCIGVKINGELKPLRTPLVNGDVVEVVRGSKPVVP
PDWRSLTVTGRARSAIRRHIRQTEKEEFLRLGRASLEQVFERAGKKLKDVSLRPILERFV
LETDEALFDAVGRGRVSPSQVLETAYPGMKDSEREAATARRKIEGGQEAARLYVRGGGLT
PGVSLHFAHCCSAVPGDRIVGILREDGEGLDVHTIDCPRLAEYEDREELWRDLNWTPEAE
RSTISLTRLHATIQNAPGVLGLVCTIIGEAGGNIVNLRMHHRQSDFFDTDIDVEVRDAKH
LTNIQAALRACPSVETVDRTRG |
NT seq |
2229 nt +upstreamnt +downstreamnt
ttgtcgtctgtggcccccgtcgctgtgaccgaagcgccggccaagccgcgccccaagttt
cttcgccaatacgaactgatcgagcgggtccacgcctatgacccgaccgccgacgaggcg
ctgctgaaccgcgcctatgtctatgcgatgcgcatgcacggctcgcagacgcgggccagc
ggcgatccctactatgctcacccgatcgaggtggcgggcatcctcaccgagtatcggctg
gacaccgcgaccatcgtcaccgcgctcctgcacgacgtgatcgaggacaccccggtcact
aaggaagagatcgccaagctgttcggcgaggagatcggcgagctggtcgagggcgtcacc
aagctctccaagcttgagctgcaggccgagcatatgcggcaggccgagaacctgcgcaaa
ttcatcctggccatctccaaggacgtgcgcgtcctgctggtcaagctggccgaccgtctg
cacaacatgcggacgctgcacttcatcaagaaccaggccaagcgcgagcgcatcgcccgc
gagacgcgcgacatctacgcgcccctggcccgcaatatcggctgtcaccgcatctgcacc
gagctggaggagctcagcttccagcacaccaacccggtggcgcgcgacgccatcatccgg
cgcctggacgtcctgcgcgaggagcagggcggggcggtgacgctggtcagtcaggaaatc
gcggcgcgcctggagtcggccagtttgccggcgcgggtctttggccgcgagaagtcgccc
tactcgatctggcgcaagctgcagcgcaagtcgatcggcttctcgcagatgtcagacatc
tatgcgttccgggtgatcgtcgacagtgaggaagactgctatcgggcgcttggcgtggtc
caccgcgcctggtccagcgtgcccgaccgcttcaaggactatatctcgacgcctaagcgg
aacaactaccgctcgctgcacaccaccgtggtggggccgcgcggcatgcgcatcgagatg
cagatccgcaccgagagcatggaccgcgtcaacgaagagggcgtcgccgcccacttccgc
tacaaggacgcctcctacgggctcgacctggaaggcatggaggccgccggcggccgcgac
ccgctggccaacctgcgccagctggtccaggtgctggagcatggcggcgacagcgaagaa
ctggtcgaacacgccaagctcgagatgttcctcgaccaggttttcgtgttcacgcccaag
ggcaagctggtcagcctgccgcgcggggccatgccactggacttcgcctatgcggttcac
accagcgtcggcgatacctgtatcggtgtgaagatcaatggcgagctcaagccgctgcgc
acgccgctggtcaatggcgatgtggttgaggtggtccggggctccaagcccgtggtcccg
cccgactggcgctcgctgacggtgacgggccgcgcccgttcggccatccgccgccatatc
cgccagaccgagaaggaagagttcctgcgtctgggccgcgcgtcgctggagcaggtgttc
gagcgcgccggcaagaagctgaaggacgtgtcgctgcggccgatcctggagcgcttcgtg
ctggagactgacgaggccctgttcgacgctgtcgggcgcggtcgggtgtcgcccagccag
gtgctggagaccgcctatccgggcatgaaggactccgagcgcgaggccgctacggcccgg
cgcaagatcgaaggcggccaggaggcggcgcggctctatgtgcgcggcggcggtctgacg
cccggcgtctcactgcacttcgcccactgctgcagcgccgtgccgggcgaccgcatcgtc
ggcatcctgcgcgaggatggtgagggcctggacgtccacaccatcgactgtccgcgcctg
gccgaatacgaggaccgcgaggaactctggcgcgacctgaactggacgcccgaggccgag
cgctcgacgatctcgctgacccgcctgcacgccaccatccagaacgcgcccggcgtgctg
ggcctggtttgcacgatcatcggcgaggccggcggcaacatcgtcaacctgcgcatgcac
caccggcagagcgacttcttcgacaccgacatcgacgtcgaggtccgcgacgccaagcac
ctgaccaacatccaggcggcgctgcgggcgtgtccctcggtggagacggtggaccggacg
cgggggtag |