Caulobacter vibrioides NA1000: CCNA_01713
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Entry
CCNA_01713 CDS
T00841
Name
(RefSeq) 2'-5' RNA ligase family protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ccs
Caulobacter vibrioides NA1000
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccs03016
]
CCNA_01713
Enzymes [BR:
ccs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CCNA_01713
Transfer RNA biogenesis [BR:
ccs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CCNA_01713
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-GeneID:
7331773
NCBI-ProteinID:
YP_002517086
UniProt:
A0A0H3C8S8
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All DBs
Position
1844752..1845330
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AA seq
192 aa
AA seq
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MPDTLQLGLPGLESPTPTDRLMFLLYPDRRTAERIALEAARLKRASGLAGPLLQTGRLHI
TLHHLGDYAGLPNDIVSKGRFAGDAVEAGAFEVVFDRAASFANRSGNNPFTLQGGEGIQP
LIAFQKALGEKMAGAALRPDRSFTPHITLLYDRQVMPEQAITPISWTVSRFALVQSKLGR
TQHIVLREWDLG
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgccagacacgcttcagcttggcctgccgggccttgagtcgcccacgccgacggatcgg
ctgatgttcctgctgtatcctgaccggcggacggccgagcgcatcgcgctggaggccgcg
cgactgaaacgggcgtccggactggccggtccgcttctccagaccggccgcctccatatc
accctgcatcatctgggcgactatgcgggcctgcccaacgacattgtcagcaaaggtcgc
ttcgccggcgacgccgtcgaggccggggcgttcgaggtggtcttcgatcgggccgccagt
ttcgccaatcgctccggcaacaaccccttcacgttgcagggcggggaggggattcagccg
ctcatcgccttccagaaagcgctgggagagaagatggcgggcgccgcgcttcgacccgat
cggagtttcacgccgcacatcaccctgctctacgaccggcaggtgatgccggagcaggcg
atcacgcccatcagttggacggtgagccgctttgccctggtgcaaagcaagcttgggcgg
acccagcacatcgtcctgcgcgagtgggacctaggctga
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